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38 items
released
fe8becfa-43b5-48c4-80bf-421e0037616f
MAGeCK mapped counts generation step
fe8becfa-43b5-48c4-80bf-421e0037616f
  • ali-mortazavi:uci-scrna-seq-kallisto-quantification-step
released
f154ac93-9c4c-42a8-9e94-0d874e293844
UCI snRNA-seq Kallisto quantification step
f154ac93-9c4c-42a8-9e94-0d874e293844
released
f1300bff-ef37-4ace-8092-3ddff6f5e9aa
BlueSTARR training and prediction step
f1300bff-ef37-4ace-8092-3ddff6f5e9aa
released
e68f1821-a161-457a-a958-10a887eec224
Gersbach FACS CRISPR screen Differential Expression Analysis Step
e68f1821-a161-457a-a958-10a887eec224
released
dde11d0e-06c1-4c46-b432-64cd926aca77
scCRISPRa differential analysis step
dde11d0e-06c1-4c46-b432-64cd926aca77
released
ddc353fd-7556-40a4-8b0d-e8575e3608b6
Gersbach GGR RNA-seq Pipeline Quantification Step
ddc353fd-7556-40a4-8b0d-e8575e3608b6
released
dc398cf9-7a2f-44b2-81a7-0211ca6b8175
CRISPR-BEAN mapped counts generation step
dc398cf9-7a2f-44b2-81a7-0211ca6b8175
released
d9e5e958-cc35-4840-a829-25f55fff1ccb
Count Matrix Generation Step
d9e5e958-cc35-4840-a829-25f55fff1ccb
released
d4b77af8-8c66-4d98-8128-8dca50d6ae23
MPRAsnakeflow Assignment Step
d4b77af8-8c66-4d98-8128-8dca50d6ae23
released
d34050b0-1ee4-445f-8fa1-901fa950ee6b
scQer bulk MPRA element quantification step
d34050b0-1ee4-445f-8fa1-901fa950ee6b
released
cc60977f-69b6-4eed-9c41-81eee63ea50e
Gersbach GGR RNA-seq Pipeline Signal Generation Step
cc60977f-69b6-4eed-9c41-81eee63ea50e
released
c2176e31-50ff-4391-b4ac-44a1fb9db25e
Gersbach FACS CRISPR screen Alignment Step
c2176e31-50ff-4391-b4ac-44a1fb9db25e
released
c01f640d-c86d-43ee-8a20-f0ffde78f5a7
HiCAR-quantification-step
c01f640d-c86d-43ee-8a20-f0ffde78f5a7
released
be25bf17-0cb1-441e-b9e0-e6c03411a22a
HiCAR-cooler-generation step
be25bf17-0cb1-441e-b9e0-e6c03411a22a
released
b9841302-4a20-42aa-bbba-e7ddef186bfe
Gersbach FACS CRISPR screen Quantification Step
b9841302-4a20-42aa-bbba-e7ddef186bfe
  • jason-buenrostro:share-seq-alignment-v2-matrix-genration-step
released
b403256c-6c46-4540-b757-5be87c7c8ebf
SHARE-seq alignment v2 matrix generation step
b403256c-6c46-4540-b757-5be87c7c8ebf
  • ali-mortazavi:uci-scrna-seq-counts-normalization-and-filtering-step
released
b18e772a-083b-4067-accb-1ae095f52efd
UCI snRNA-seq counts normalization and filtering step
b18e772a-083b-4067-accb-1ae095f52efd
released
b0f81fa7-0cdc-4c08-90de-3977300ebd95
MPRAflow assignment step
b0f81fa7-0cdc-4c08-90de-3977300ebd95
released
b0e1802f-5297-45d5-937d-37ad121015cd
MPRAsnakeflow mpralm Variant Annotation Step
b0e1802f-5297-45d5-937d-37ad121015cd
released
ac6b1d1b-8b06-490f-afae-9e82db50a646
Gersbach GGR ATAC-seq Pipeline Peak Generation Step
ac6b1d1b-8b06-490f-afae-9e82db50a646
  • ansuman-satpathy:satpathy-fragment-generation-step
released
aae548c6-ad56-4b2c-9082-ec2b8ce96aa3
Satpathy Fragment Generation Step
aae548c6-ad56-4b2c-9082-ec2b8ce96aa3
released
9c4c17a3-bc51-4b76-b931-5e8136d554e1
MPRAnalyze Variant Annotation Step
9c4c17a3-bc51-4b76-b931-5e8136d554e1
released
9c05fe86-50e4-47d2-98ad-d84870920327
Gersbach GGR ATAC-seq Pipeline Alignment Step
9c05fe86-50e4-47d2-98ad-d84870920327
released
9b2034e1-6d15-4730-b417-4ea51e296a14
MAGeCK modeling step
9b2034e1-6d15-4730-b417-4ea51e296a14
released
964354c6-2aeb-4e1a-bee2-48c00af47c94
MPRAsnakeflow Quantification Step
964354c6-2aeb-4e1a-bee2-48c00af47c94