IGVFDS9202ZPBI

/human-donors/IGVFDO9588OERW/, /human-donors/IGVFDO1522NSLA/

intermediate analysis

/measurement-sets/IGVFDS0986HRDF/, /measurement-sets/IGVFDS5328ZNKL/

CD8-positive, alpha-beta memory T cell primary cell, transfected with a expression vector library

/primary-cells/IGVFSM7232YAVV/, /primary-cells/IGVFSM8821YQXI/

released

ATAC-seq: alignments

Homo sapiens

fdbe1d71-d4b0-4025-a01e-46b963a45785

IGVFDS6344XBAV

/human-donors/IGVFDO9588OERW/, /human-donors/IGVFDO1522NSLA/

principal analysis

/analysis-sets/IGVFDS9202ZPBI/, /analysis-sets/IGVFDS3609QWUZ/

CD8-positive, alpha-beta memory T cell primary cell, transfected with a expression vector library

/primary-cells/IGVFSM6508DFUL/, /primary-cells/IGVFSM7232YAVV/, /primary-cells/IGVFSM3805WZUU/, /primary-cells/IGVFSM8821YQXI/

released

ATAC-seq: fold change over control, peak quantifications

Homo sapiens

fcdc0263-c1e7-4ba0-87ba-5bcbfef7461c

IGVFDS0320JXJG

/human-donors/IGVFDO4579FYIL/, /human-donors/IGVFDO3231VPAA/, /human-donors/IGVFDO5479ZYLJ/

principal analysis

CD8-positive, alpha-beta memory T cell primary cell, modified with CRISPR modifications, transfected with a guide library, sorted on expression of CCR7

/primary-cells/IGVFSM7418TTPB/, /primary-cells/IGVFSM7634EVUP/, /primary-cells/IGVFSM4110AXZO/, /primary-cells/IGVFSM6002TGBI/, /primary-cells/IGVFSM8964QQSX/, /primary-cells/IGVFSM1721KPGX/

released

CRISPR activation FACS screen targeting CCR7: fold change over control, guide quantifications

Homo sapiens

f42d6b34-7961-4abb-be67-24603b5792dc

IGVFDS4430NOFL

/human-donors/IGVFDO7589UJKG/, /human-donors/IGVFDO4048LCOU/, /human-donors/IGVFDO8565PQXZ/

intermediate analysis

/measurement-sets/IGVFDS3760HQCL/, /measurement-sets/IGVFDS4636NLRL/, /measurement-sets/IGVFDS3198NMHN/

https://www.protocols.io/view/rnaseq-of-primary-human-t-cells-overexpressing-bat-c5pdy5i6, https://www.protocols.io/view/tfome-crisprko-screens-81wgbxk8olpk/v1

CD8-positive, alpha-beta memory T cell primary cell, modified with CRISPR modifications, transfected with a guide library

/primary-cells/IGVFSM1311HWOF/, /primary-cells/IGVFSM5367RVVU/, /primary-cells/IGVFSM5949AWIH/

released

knockout RNA-seq: transcriptome alignments

Homo sapiens

dff2d881-73ed-413d-888f-11c0015c09cd

IGVFDS5056OAGR

principal analysis

/measurement-sets/IGVFDS5714UWEJ/, /measurement-sets/IGVFDS6473LUNY/, /measurement-sets/IGVFDS7093IAOE/, /measurement-sets/IGVFDS5910HARH/, /measurement-sets/IGVFDS2504PFZO/, /measurement-sets/IGVFDS4945KDNO/, /measurement-sets/IGVFDS8032KCGK/, /measurement-sets/IGVFDS6385JXFZ/, /measurement-sets/IGVFDS6859ZHTQ/, /measurement-sets/IGVFDS6731AKUS/, /measurement-sets/IGVFDS8138GVAT/, /measurement-sets/IGVFDS7472ZHUE/, /measurement-sets/IGVFDS4371VPAL/, /measurement-sets/IGVFDS4043NWWM/, /measurement-sets/IGVFDS7434URBG/, /measurement-sets/IGVFDS3964BHOX/, /measurement-sets/IGVFDS7400NQET/, /measurement-sets/IGVFDS9818UYJH/, /measurement-sets/IGVFDS0126OPKX/, /measurement-sets/IGVFDS5374LMRK/, /measurement-sets/IGVFDS0735XAQF/, /measurement-sets/IGVFDS6066LBCV/, /measurement-sets/IGVFDS4786QNDV/, /measurement-sets/IGVFDS1293ORGQ/, /measurement-sets/IGVFDS2641ALJQ/, /measurement-sets/IGVFDS3845OXSE/, /measurement-sets/IGVFDS9920OIUA/, /measurement-sets/IGVFDS9276HGOM/, /measurement-sets/IGVFDS7692AEEW/, /measurement-sets/IGVFDS3442RJBW/, /measurement-sets/IGVFDS7205UOTV/, /measurement-sets/IGVFDS6498KFQL/, /measurement-sets/IGVFDS5416ECKJ/, /measurement-sets/IGVFDS1711PRHO/, /measurement-sets/IGVFDS3198NALA/, /measurement-sets/IGVFDS8377HOWJ/, /measurement-sets/IGVFDS1482MIEF/, /measurement-sets/IGVFDS1696YMUM/, /measurement-sets/IGVFDS5937NTSM/, /measurement-sets/IGVFDS9844CWDW/, /measurement-sets/IGVFDS0634BYKS/, /measurement-sets/IGVFDS6214RDRM/, /measurement-sets/IGVFDS2963KTVM/, /measurement-sets/IGVFDS9444IQCJ/, /measurement-sets/IGVFDS4722YXGE/, /measurement-sets/IGVFDS5439ZLTA/, /measurement-sets/IGVFDS3243KYES/, /measurement-sets/IGVFDS6880HZFB/, /measurement-sets/IGVFDS0881DJJG/, /measurement-sets/IGVFDS2067RNFB/, /measurement-sets/IGVFDS6112CFBJ/, /measurement-sets/IGVFDS2167TBGK/, /measurement-sets/IGVFDS0182ZKUF/, /measurement-sets/IGVFDS3659HSOV/, /measurement-sets/IGVFDS5961WERM/, /measurement-sets/IGVFDS9005ISSR/, /measurement-sets/IGVFDS3899ANMJ/, /measurement-sets/IGVFDS6756WKPU/, /measurement-sets/IGVFDS6538ISBQ/, /measurement-sets/IGVFDS5927FYNR/, /measurement-sets/IGVFDS7530NWPC/, /measurement-sets/IGVFDS6624WHBQ/, /measurement-sets/IGVFDS8949ZDBE/, /measurement-sets/IGVFDS4701EMZA/, /measurement-sets/IGVFDS0300ELGK/, /measurement-sets/IGVFDS7365REMW/, /measurement-sets/IGVFDS0968GSSQ/, /measurement-sets/IGVFDS8067PUZX/, /measurement-sets/IGVFDS3851CVMG/, /measurement-sets/IGVFDS2443IKFM/, /measurement-sets/IGVFDS0592EWPO/, /measurement-sets/IGVFDS5001PJTX/, /measurement-sets/IGVFDS0286JWIW/, /measurement-sets/IGVFDS6367YJDA/, /measurement-sets/IGVFDS0410OHWU/, /measurement-sets/IGVFDS4716SNKJ/, /measurement-sets/IGVFDS5585HGSK/, /measurement-sets/IGVFDS8830XMQR/

THP-1 cell line, modified with CRISPR modifications, transfected with a guide library, sorted on expression of PPIF

/in-vitro-systems/IGVFSM4295RBJG/, /in-vitro-systems/IGVFSM1400DZMP/, /in-vitro-systems/IGVFSM1683BAMH/, /in-vitro-systems/IGVFSM9690YXEE/, /in-vitro-systems/IGVFSM1989ECAN/, /in-vitro-systems/IGVFSM3137EVKW/, /in-vitro-systems/IGVFSM3814ESVL/, /in-vitro-systems/IGVFSM1388TFMJ/, /in-vitro-systems/IGVFSM9994CSTP/, /in-vitro-systems/IGVFSM8972CLRU/, /in-vitro-systems/IGVFSM3062EIHZ/, /in-vitro-systems/IGVFSM0701VWIZ/, /in-vitro-systems/IGVFSM9234DKCR/, /in-vitro-systems/IGVFSM1757XEWZ/, /in-vitro-systems/IGVFSM0787QFVT/, /in-vitro-systems/IGVFSM1133ETJG/, /in-vitro-systems/IGVFSM0484FSRU/, /in-vitro-systems/IGVFSM0595JWOO/, /in-vitro-systems/IGVFSM0863WEQJ/, /in-vitro-systems/IGVFSM3056BTTL/, /in-vitro-systems/IGVFSM1606JQTG/, /in-vitro-systems/IGVFSM9746ERJH/, /in-vitro-systems/IGVFSM6928KZFH/, /in-vitro-systems/IGVFSM1218VKDC/, /in-vitro-systems/IGVFSM2043RUDS/, /in-vitro-systems/IGVFSM9808CICG/, /in-vitro-systems/IGVFSM0994FYUT/, /in-vitro-systems/IGVFSM3490JPYE/, /in-vitro-systems/IGVFSM9472SJJU/, /in-vitro-systems/IGVFSM6376JXGZ/, /in-vitro-systems/IGVFSM4767DNSQ/, /in-vitro-systems/IGVFSM2216EFEX/, /in-vitro-systems/IGVFSM5063WIJW/, /in-vitro-systems/IGVFSM7667TLNR/, /in-vitro-systems/IGVFSM9316MGHL/, /in-vitro-systems/IGVFSM8920YWJY/, /in-vitro-systems/IGVFSM6375ITVK/, /in-vitro-systems/IGVFSM0226JSRH/, /in-vitro-systems/IGVFSM8988WXEB/, /in-vitro-systems/IGVFSM3254FGUG/, /in-vitro-systems/IGVFSM8470FMQN/, /in-vitro-systems/IGVFSM9821UQTT/, /in-vitro-systems/IGVFSM9337QVAD/, /in-vitro-systems/IGVFSM4555JSOF/, /in-vitro-systems/IGVFSM9849CZIJ/, /in-vitro-systems/IGVFSM1041JPLJ/, /in-vitro-systems/IGVFSM0320EORI/, /in-vitro-systems/IGVFSM0591ZRYW/, /in-vitro-systems/IGVFSM2895VEVU/, /in-vitro-systems/IGVFSM7879WOKC/, /in-vitro-systems/IGVFSM0075VGTB/, /in-vitro-systems/IGVFSM7338BXZP/, /in-vitro-systems/IGVFSM0046YFNI/, /in-vitro-systems/IGVFSM1036VGPE/, /in-vitro-systems/IGVFSM4973WSEU/, /in-vitro-systems/IGVFSM8189JDTX/, /in-vitro-systems/IGVFSM8604RBAL/, /in-vitro-systems/IGVFSM1994AWYG/, /in-vitro-systems/IGVFSM6445TGKO/, /in-vitro-systems/IGVFSM1018AFSU/, /in-vitro-systems/IGVFSM5557UHMD/, /in-vitro-systems/IGVFSM8384KCKA/, /in-vitro-systems/IGVFSM0583RNTC/, /in-vitro-systems/IGVFSM7602FHUT/, /in-vitro-systems/IGVFSM1309CTNL/, /in-vitro-systems/IGVFSM7846WBRV/, /in-vitro-systems/IGVFSM2582ALNT/, /in-vitro-systems/IGVFSM1355ITKK/, /in-vitro-systems/IGVFSM7066SDHY/, /in-vitro-systems/IGVFSM3596XEKI/, /in-vitro-systems/IGVFSM4143IEHE/, /in-vitro-systems/IGVFSM8276OEZZ/, /in-vitro-systems/IGVFSM2812NEWC/, /in-vitro-systems/IGVFSM1147YJAE/, /in-vitro-systems/IGVFSM8224ZLFH/, /in-vitro-systems/IGVFSM2522SXJT/, /in-vitro-systems/IGVFSM7075GWHP/, /in-vitro-systems/IGVFSM8173RIRG/

released

prime editing Variant FlowFISH targeting PPIF: variant effects

Homo sapiens

dea7577f-6bac-4753-b75e-794685cfd73e

IGVFDS2302NLIO

/human-donors/IGVFDO8289ZMDD/, /human-donors/IGVFDO9588OERW/, /human-donors/IGVFDO1522NSLA/

principal analysis

/analysis-sets/IGVFDS1013MILB/, /analysis-sets/IGVFDS7714RCSY/

CD8-positive, alpha-beta memory T cell primary cell, transfected with a expression vector library

/primary-cells/IGVFSM0293OVAT/, /primary-cells/IGVFSM0066TACG/, /primary-cells/IGVFSM4716FORO/, /primary-cells/IGVFSM3998OQDA/, /primary-cells/IGVFSM6851CRLW/, /primary-cells/IGVFSM8800PZZL/

released

ATAC-seq: fold change over control, peak quantifications

Homo sapiens

dddf113e-e357-4ec4-bb4f-ab705219db19

IGVFDS5478QWPN

/human-donors/IGVFDO0512VHUM/, /human-donors/IGVFDO2154QIFS/, /human-donors/IGVFDO1648DRBT/

intermediate analysis

/auxiliary-sets/IGVFDS2036IYZB/, /auxiliary-sets/IGVFDS8935CYSH/, /auxiliary-sets/IGVFDS1323NNMG/, /auxiliary-sets/IGVFDS8972XOSG/, /auxiliary-sets/IGVFDS3792YMVB/, /auxiliary-sets/IGVFDS0128XYUT/

Jurkat cell line, modified with CRISPR modifications, transfected with a guide library, sorted on expression of IL2RA

/in-vitro-systems/IGVFSM7748IVLZ/, /in-vitro-systems/IGVFSM1480DJBL/, /in-vitro-systems/IGVFSM4401YRWQ/, /in-vitro-systems/IGVFSM3148FRBY/, /in-vitro-systems/IGVFSM3606VJWU/, /in-vitro-systems/IGVFSM2737ATVK/

released

CRISPR activation FACS screen targeting IL2RA: alignments

Homo sapiens

d4e70a0f-f071-4b8e-abe4-0fdc2515d72d

IGVFDS1013MILB

/human-donors/IGVFDO8289ZMDD/, /human-donors/IGVFDO9588OERW/, /human-donors/IGVFDO1522NSLA/

intermediate analysis

/measurement-sets/IGVFDS1619VKNB/, /measurement-sets/IGVFDS2737CQNK/, /measurement-sets/IGVFDS5292QYYE/

CD8-positive, alpha-beta memory T cell primary cell, transfected with a expression vector library

/primary-cells/IGVFSM0293OVAT/, /primary-cells/IGVFSM0066TACG/, /primary-cells/IGVFSM4716FORO/

released

ATAC-seq: alignments

Homo sapiens

cbbc4619-f9a7-4299-a027-a8ce786a0ebf

IGVFDS4488GLKL

/human-donors/IGVFDO4579FYIL/, /human-donors/IGVFDO5479ZYLJ/, /human-donors/IGVFDO3231VPAA/

intermediate analysis

/auxiliary-sets/IGVFDS5903JKGX/, /auxiliary-sets/IGVFDS5759ZVUX/, /auxiliary-sets/IGVFDS6878SUMX/, /auxiliary-sets/IGVFDS7251RDFD/, /auxiliary-sets/IGVFDS9073AJJA/, /auxiliary-sets/IGVFDS9310VIMF/

CD8-positive, alpha-beta memory T cell primary cell, modified with CRISPR modifications, transfected with a guide library, sorted on expression of CCR7

/primary-cells/IGVFSM4110AXZO/, /primary-cells/IGVFSM7634EVUP/, /primary-cells/IGVFSM1721KPGX/, /primary-cells/IGVFSM8964QQSX/, /primary-cells/IGVFSM6002TGBI/, /primary-cells/IGVFSM7418TTPB/

released

CRISPR activation FACS screen targeting CCR7: alignments

Homo sapiens

cb6bfc95-81ab-4c2e-9fa5-a0b8ddbeb1dd

IGVFDS7196OWBU

/human-donors/IGVFDO2560LMUL/, /human-donors/IGVFDO4048MCTZ/, /human-donors/IGVFDO9862HFWL/

principal analysis

Jurkat cell line, modified with CRISPR modifications, transfected with a guide library, sorted on expression of IL2RA

/in-vitro-systems/IGVFSM1838CFFU/, /in-vitro-systems/IGVFSM2429HKWG/, /in-vitro-systems/IGVFSM4817IZZH/, /in-vitro-systems/IGVFSM6964ODEE/, /in-vitro-systems/IGVFSM3244YHOI/, /in-vitro-systems/IGVFSM5112IFQB/

released

CRISPR activation FACS screen targeting IL2RA: fold change over control, guide quantifications

Homo sapiens

c9f8cd5c-a95e-4d84-a5d6-92ad2c1f5f6d

IGVFDS7944XZYE

/human-donors/IGVFDO2763RVOY/, /human-donors/IGVFDO8306NDTY/

intermediate analysis

/auxiliary-sets/IGVFDS2606RJRX/, /auxiliary-sets/IGVFDS4170XDRQ/, /auxiliary-sets/IGVFDS3370BGRA/, /auxiliary-sets/IGVFDS2210LUUT/

CD8-positive, alpha-beta memory T cell primary cell, modified with CRISPR modifications, transfected with a guide library, sorted on expression of IL7R

/primary-cells/IGVFSM7887TFLH/, /primary-cells/IGVFSM7158ADKU/, /primary-cells/IGVFSM8084QKPW/, /primary-cells/IGVFSM3895SURE/

released

CRISPR knockout FACS screen targeting IL7R: alignments

Homo sapiens

c9181de6-0db8-4056-a95d-030bb2a5b02d

IGVFDS7801YPEU

principal analysis

/measurement-sets/IGVFDS1560LMQZ/, /measurement-sets/IGVFDS6675BDQA/, /measurement-sets/IGVFDS7446XPVQ/, /measurement-sets/IGVFDS0935XBYS/

mouse embryonic stem cell differentiated cell specimen induced to embryoid body, at 1 time point(s) post change

/in-vitro-systems/IGVFSM4284RDJK/, /in-vitro-systems/IGVFSM9475FJUV/, /in-vitro-systems/IGVFSM7126ZMPT/, /in-vitro-systems/IGVFSM6820XJKR/

released

scATAC-seq: signal

Mus musculus

c69d7cb4-f432-4b38-b99c-7233b7d96af5

IGVFDS4021XJLW

principal analysis

/measurement-sets/IGVFDS9384BVGM/, /measurement-sets/IGVFDS0272VVTX/, /measurement-sets/IGVFDS2385QENN/, /measurement-sets/IGVFDS2133JAFB/, /auxiliary-sets/IGVFDS8386FNRJ/, /auxiliary-sets/IGVFDS2220HHTN/, /auxiliary-sets/IGVFDS2532AVSC/, /auxiliary-sets/IGVFDS7598WPXV/

GM25256 (WTC-11) differentiated cell specimen induced to neuron, at 1 time point(s) post change, modified with CRISPR modifications, transfected with a guide library

/in-vitro-systems/IGVFSM9913PXTT/, /in-vitro-systems/IGVFSM7750SNNY/, /in-vitro-systems/IGVFSM8382KOXO/, /in-vitro-systems/IGVFSM8317ZTFV/

released

scCRISPR activation screen: differential gene expression quantifications, sparse gene count matrix

Homo sapiens

c54949f6-6673-4a8e-a213-5cb972f23dea

IGVFDS9053MHCS

principal analysis

/measurement-sets/IGVFDS8529BNPK/, /measurement-sets/IGVFDS8329NAOV/, /measurement-sets/IGVFDS0071OLHI/, /measurement-sets/IGVFDS6709HOZL/, /measurement-sets/IGVFDS2367NFMX/, /measurement-sets/IGVFDS0882RKGQ/, /measurement-sets/IGVFDS8252XAWN/, /measurement-sets/IGVFDS6694UWZS/, /measurement-sets/IGVFDS8508PSMW/, /measurement-sets/IGVFDS3115BOGO/, /measurement-sets/IGVFDS4378DCUS/, /measurement-sets/IGVFDS9231LVGR/, /measurement-sets/IGVFDS1890YDYU/, /measurement-sets/IGVFDS2108LFDU/, /measurement-sets/IGVFDS0018LXFE/, /measurement-sets/IGVFDS2419JZMR/, /auxiliary-sets/IGVFDS0176EPZP/, /auxiliary-sets/IGVFDS2360YYBI/, /auxiliary-sets/IGVFDS4798IFBG/, /auxiliary-sets/IGVFDS1940YJWG/, /auxiliary-sets/IGVFDS5846AAXB/, /auxiliary-sets/IGVFDS7307RZZC/, /auxiliary-sets/IGVFDS6384XJTD/, /auxiliary-sets/IGVFDS6130NFHZ/, /auxiliary-sets/IGVFDS4347NQJP/, /auxiliary-sets/IGVFDS0127ALOS/, /auxiliary-sets/IGVFDS6271YGUP/, /auxiliary-sets/IGVFDS5117CMSR/, /auxiliary-sets/IGVFDS5333EUSF/, /auxiliary-sets/IGVFDS5244YZVE/, /auxiliary-sets/IGVFDS9830AWTI/, /auxiliary-sets/IGVFDS8749RHTV/

TeloHAEC cell line, modified with CRISPR modifications, transfected with a guide library, sorted into bins

/in-vitro-systems/IGVFSM8121JQAK/, /in-vitro-systems/IGVFSM2756NFXE/, /in-vitro-systems/IGVFSM9054OJLH/, /in-vitro-systems/IGVFSM0599MHTG/, /in-vitro-systems/IGVFSM6823DARA/, /in-vitro-systems/IGVFSM5229SOKC/, /in-vitro-systems/IGVFSM8115WXZU/, /in-vitro-systems/IGVFSM2155YTIW/, /in-vitro-systems/IGVFSM5826EWDE/, /in-vitro-systems/IGVFSM7436UMQD/, /in-vitro-systems/IGVFSM9750UXVD/, /in-vitro-systems/IGVFSM7319EZLZ/, /in-vitro-systems/IGVFSM6408QEFG/, /in-vitro-systems/IGVFSM5424HTHI/, /in-vitro-systems/IGVFSM3508ZAFL/, /in-vitro-systems/IGVFSM6467VTYE/

released

CRISPR interference FlowFISH screen

Homo sapiens

c38ce05d-b4a3-4d3e-bf38-b9c8828ef22e

IGVFDS0006MFFD

/human-donors/IGVFDO7589UJKG/, /human-donors/IGVFDO4048LCOU/, /human-donors/IGVFDO8565PQXZ/

intermediate analysis

/measurement-sets/IGVFDS0870PAHS/, /measurement-sets/IGVFDS0416TFEL/, /measurement-sets/IGVFDS3969UCCQ/

https://www.protocols.io/view/tfome-crisprko-screens-81wgbxk8olpk/v1, https://www.protocols.io/view/rnaseq-of-primary-human-t-cells-overexpressing-bat-c5pdy5i6

CD8-positive, alpha-beta memory T cell primary cell, modified with CRISPR modifications, transfected with a guide library

/primary-cells/IGVFSM9627TJZO/, /primary-cells/IGVFSM0829UPAR/, /primary-cells/IGVFSM7117ATUZ/

released

knockout RNA-seq: transcriptome alignments

Homo sapiens

c10bcb2b-b7a3-47a2-b515-617df0549089

IGVFDS9906UGWB

/human-donors/IGVFDO4048LCOU/, /human-donors/IGVFDO8565PQXZ/, /human-donors/IGVFDO7589UJKG/

principal analysis

/analysis-sets/IGVFDS4430NOFL/, /analysis-sets/IGVFDS6924DJJC/

CD8-positive, alpha-beta memory T cell primary cell, modified with CRISPR modifications, transfected with a guide library

/primary-cells/IGVFSM5949AWIH/, /primary-cells/IGVFSM0383IKGE/, /primary-cells/IGVFSM1498WFCO/, /primary-cells/IGVFSM1311HWOF/, /primary-cells/IGVFSM6537MPGY/, /primary-cells/IGVFSM5367RVVU/

released

knockout RNA-seq: fold change over control, transcript quantifications

Homo sapiens

bd513393-12b9-40a3-b24f-d528d7f8dc24

IGVFDS3423PSID

principal analysis

/measurement-sets/IGVFDS1402WRSD/, /measurement-sets/IGVFDS2978YQVA/, /measurement-sets/IGVFDS0403DJHI/, /measurement-sets/IGVFDS7791SSYA/, /measurement-sets/IGVFDS8356GTHO/, /measurement-sets/IGVFDS5864UGFT/, /measurement-sets/IGVFDS8290UELV/, /measurement-sets/IGVFDS4745BLLN/, /measurement-sets/IGVFDS8801DBGC/, /measurement-sets/IGVFDS7403HHLV/, /measurement-sets/IGVFDS9084GQXI/, /measurement-sets/IGVFDS6551IWAB/, /measurement-sets/IGVFDS5733FUWG/, /measurement-sets/IGVFDS6761PEJX/, /measurement-sets/IGVFDS9894YFSM/, /measurement-sets/IGVFDS3226EEYN/, /measurement-sets/IGVFDS4761PXVO/, /measurement-sets/IGVFDS0336ABEV/, /measurement-sets/IGVFDS1646OXQU/, /measurement-sets/IGVFDS9665GYVE/, /measurement-sets/IGVFDS8854UNCC/, /measurement-sets/IGVFDS6512WYQI/, /measurement-sets/IGVFDS6147NJBC/, /measurement-sets/IGVFDS6622DPIT/, /measurement-sets/IGVFDS6566NSFE/, /measurement-sets/IGVFDS4761MJPK/, /measurement-sets/IGVFDS7009ITAD/, /measurement-sets/IGVFDS8631OYNB/, /measurement-sets/IGVFDS1674OUCP/, /measurement-sets/IGVFDS8517SHZG/, /measurement-sets/IGVFDS4750CFGI/, /measurement-sets/IGVFDS1327XCCU/, /measurement-sets/IGVFDS3537WUVG/, /measurement-sets/IGVFDS1783OBDQ/, /measurement-sets/IGVFDS8736JDCM/, /measurement-sets/IGVFDS6267YRNH/, /measurement-sets/IGVFDS0744DITV/, /measurement-sets/IGVFDS0629YEMD/, /measurement-sets/IGVFDS4715UUNW/, /measurement-sets/IGVFDS5699JBLV/, /measurement-sets/IGVFDS3532HUSQ/

THP-1 cell line, modified with CRISPR modifications, transfected with a guide library, sorted on expression of PPIF

/in-vitro-systems/IGVFSM1276SAGC/, /in-vitro-systems/IGVFSM4383GTZM/, /in-vitro-systems/IGVFSM5627EEDY/, /in-vitro-systems/IGVFSM9876ONTE/, /in-vitro-systems/IGVFSM8031IIWI/, /in-vitro-systems/IGVFSM9197BHPY/, /in-vitro-systems/IGVFSM0705YYHP/, /in-vitro-systems/IGVFSM5844KEUJ/, /in-vitro-systems/IGVFSM9365FWZA/, /in-vitro-systems/IGVFSM0805ZKDV/, /in-vitro-systems/IGVFSM7075RRIN/, /in-vitro-systems/IGVFSM3818KKHR/, /in-vitro-systems/IGVFSM6259GNEC/, /in-vitro-systems/IGVFSM3986RDKP/, /in-vitro-systems/IGVFSM6465SGTZ/, /in-vitro-systems/IGVFSM4588UXMN/, /in-vitro-systems/IGVFSM0996COAP/, /in-vitro-systems/IGVFSM6463YBYJ/, /in-vitro-systems/IGVFSM6276DPKS/, /in-vitro-systems/IGVFSM4853BCZC/, /in-vitro-systems/IGVFSM4195NXPO/, /in-vitro-systems/IGVFSM8427KPPU/, /in-vitro-systems/IGVFSM5150FUTV/, /in-vitro-systems/IGVFSM8901HJRO/, /in-vitro-systems/IGVFSM4125CFFV/, /in-vitro-systems/IGVFSM5332OJBP/, /in-vitro-systems/IGVFSM3965ATNS/, /in-vitro-systems/IGVFSM4073LMYD/, /in-vitro-systems/IGVFSM6349GRPM/, /in-vitro-systems/IGVFSM4599PEWQ/, /in-vitro-systems/IGVFSM1854TJZA/, /in-vitro-systems/IGVFSM5175SJIS/, /in-vitro-systems/IGVFSM2674RBOA/, /in-vitro-systems/IGVFSM5940EPFP/, /in-vitro-systems/IGVFSM2408BZVR/, /in-vitro-systems/IGVFSM8306UJIK/, /in-vitro-systems/IGVFSM7954ICIY/, /in-vitro-systems/IGVFSM9715TWHE/, /in-vitro-systems/IGVFSM9821NUGZ/, /in-vitro-systems/IGVFSM0143XZGF/, /in-vitro-systems/IGVFSM3394FCPH/

released

prime editing Variant FlowFISH targeting PPIF: variant effects

Homo sapiens

bcc90877-c6bd-46e8-b293-3114aa975297

IGVFDS5498STRV

/human-donors/IGVFDO4080HFHD/, /human-donors/IGVFDO1423VLXL/

intermediate analysis

/auxiliary-sets/IGVFDS0506WOIW/, /auxiliary-sets/IGVFDS7413JPIS/, /auxiliary-sets/IGVFDS8866USWP/, /auxiliary-sets/IGVFDS8876GCAP/

CD8-positive, alpha-beta memory T cell primary cell, modified with CRISPR modifications, transfected with a guide library, sorted on expression of CD2

/primary-cells/IGVFSM4694MBIW/, /primary-cells/IGVFSM6350DJQS/, /primary-cells/IGVFSM7658WDNM/, /primary-cells/IGVFSM7030KVXG/

released

CRISPR interference FACS screen targeting CD2: alignments

Homo sapiens

baeb521d-0294-4610-9bef-b4d4aba46622

IGVFDS6924DJJC

/human-donors/IGVFDO7589UJKG/, /human-donors/IGVFDO4048LCOU/, /human-donors/IGVFDO8565PQXZ/

intermediate analysis

/measurement-sets/IGVFDS4169BMPH/, /measurement-sets/IGVFDS6088VPGO/, /measurement-sets/IGVFDS9846EQXV/

https://www.protocols.io/view/tfome-crisprko-screens-81wgbxk8olpk/v1, https://www.protocols.io/view/rnaseq-of-primary-human-t-cells-overexpressing-bat-c5pdy5i6

CD8-positive, alpha-beta memory T cell primary cell, modified with CRISPR modifications, transfected with a guide library

/primary-cells/IGVFSM0383IKGE/, /primary-cells/IGVFSM6537MPGY/, /primary-cells/IGVFSM1498WFCO/

released

knockout RNA-seq: transcriptome alignments

Homo sapiens

b8fbe5f7-2d40-453c-9c81-f4b616dab9ef

IGVFDS4011VZXE

/human-donors/IGVFDO6082RNLT/, /human-donors/IGVFDO7605NZFO/, /human-donors/IGVFDO4425KRAT/

intermediate analysis

/measurement-sets/IGVFDS6764PIJI/, /measurement-sets/IGVFDS1675WFHV/, /measurement-sets/IGVFDS0238VKNF/, /auxiliary-sets/IGVFDS9108NLTS/, /auxiliary-sets/IGVFDS0993OMZM/, /auxiliary-sets/IGVFDS3945FAEL/

https://www.protocols.io/view/perturb-seq-characterizing-regulators-of-t-cell-fu-c5s9y6h6, https://www.protocols.io/view/crispra-tiling-screens-c5rfy53n

CD8-positive, alpha-beta memory T cell primary cell, modified with CRISPR modifications, transfected with a guide library

/primary-cells/IGVFSM2105CLXS/, /primary-cells/IGVFSM6223YCQV/, /primary-cells/IGVFSM8036VPRU/

released

activation Perturb-seq: filtered feature barcode matrix

Homo sapiens

b7d27188-86fc-4964-a36f-ac734749c151

IGVFDS8648GJCE

/rodent-donors/IGVFDO1486RZJK/, /rodent-donors/IGVFDO4816HOFW/, /rodent-donors/IGVFDO9333ACQP/, /rodent-donors/IGVFDO7361LABA/, /rodent-donors/IGVFDO3261YWHI/, /rodent-donors/IGVFDO0493VGMC/, /rodent-donors/IGVFDO8652OFEQ/, /rodent-donors/IGVFDO6942KQBN/

intermediate analysis

https://www.protocols.io/view/evercode-single-index-pcr-5jyl82k9rl2w/v1, https://www.protocols.io/view/protocol-to-isolate-and-fix-nuclei-from-cryopreser-4r3l22y2pl1y/v1, https://www.protocols.io/view/evercode-wt-v2-2-1-eq2lyj9relx9/v1

left cerebral cortex multiplexed sample

released

Parse SPLiT-seq: sparse gene count matrix

Mus musculus

b0ec51fa-9a24-428a-aa50-762759cd0de0

IGVFDS7323SUVK

/rodent-donors/IGVFDO1486RZJK/, /rodent-donors/IGVFDO4816HOFW/, /rodent-donors/IGVFDO9333ACQP/, /rodent-donors/IGVFDO7361LABA/, /rodent-donors/IGVFDO3261YWHI/, /rodent-donors/IGVFDO0493VGMC/, /rodent-donors/IGVFDO8652OFEQ/, /rodent-donors/IGVFDO6942KQBN/

intermediate analysis

https://www.protocols.io/view/evercode-single-index-pcr-5jyl82k9rl2w/v1, https://www.protocols.io/view/protocol-to-isolate-and-fix-nuclei-from-cryopreser-4r3l22y2pl1y/v1, https://www.protocols.io/view/evercode-wt-v2-2-1-eq2lyj9relx9/v1

left cerebral cortex multiplexed sample

released

Parse SPLiT-seq: sparse gene count matrix

Mus musculus

b0c70bcb-f243-4953-b90f-c8108be21a78

IGVFDS5066GYDY

/human-donors/IGVFDO9588OERW/, /human-donors/IGVFDO1522NSLA/, /human-donors/IGVFDO8289ZMDD/

intermediate analysis

/measurement-sets/IGVFDS0965VVJT/, /measurement-sets/IGVFDS9825YLAW/, /measurement-sets/IGVFDS1336JNHX/

CD8-positive, alpha-beta memory T cell primary cell, transfected with a expression vector library

/primary-cells/IGVFSM0218YCAH/, /primary-cells/IGVFSM7232YAVV/, /primary-cells/IGVFSM8821YQXI/

released

RNA-seq: transcriptome alignments

Homo sapiens

aeec9151-d161-46f5-99b9-7d53666a02e4

IGVFDS5239SBBT

/human-donors/IGVFDO4425KRAT/, /human-donors/IGVFDO6082RNLT/, /human-donors/IGVFDO7605NZFO/

principal analysis

CD8-positive, alpha-beta memory T cell primary cell, modified with CRISPR modifications, transfected with a guide library

/primary-cells/IGVFSM8036VPRU/, /primary-cells/IGVFSM6223YCQV/, /primary-cells/IGVFSM2105CLXS/

released

activation Perturb-seq: differential gene expression quantifications

Homo sapiens

a5f775f7-1681-4552-b045-6d06acb8a4ee

IGVFDS5031MNRR

principal analysis

/measurement-sets/IGVFDS2708HTXW/, /measurement-sets/IGVFDS9345IHWB/, /measurement-sets/IGVFDS7952EIJE/, /measurement-sets/IGVFDS9571BWRT/, /measurement-sets/IGVFDS5405RYGU/, /measurement-sets/IGVFDS4989HPTW/, /measurement-sets/IGVFDS1144XHLC/, /measurement-sets/IGVFDS6176JWXB/, /measurement-sets/IGVFDS2059ELNJ/, /measurement-sets/IGVFDS1183IGHQ/, /measurement-sets/IGVFDS7083JDYN/, /measurement-sets/IGVFDS6071XLAA/, /measurement-sets/IGVFDS3823MIDB/, /measurement-sets/IGVFDS5341DFHM/, /measurement-sets/IGVFDS1285SAVV/, /measurement-sets/IGVFDS5477WNYP/, /measurement-sets/IGVFDS3368XILR/, /measurement-sets/IGVFDS5892ADAN/, /measurement-sets/IGVFDS7933SDSN/, /measurement-sets/IGVFDS0621TDYK/, /measurement-sets/IGVFDS9179GDAL/, /measurement-sets/IGVFDS8504HJPW/, /measurement-sets/IGVFDS8518OHPN/, /measurement-sets/IGVFDS8339LZYX/, /measurement-sets/IGVFDS8629CPYB/, /measurement-sets/IGVFDS2890JPBI/, /measurement-sets/IGVFDS0816EELG/, /measurement-sets/IGVFDS4386IYQY/, /measurement-sets/IGVFDS5601DSMT/, /measurement-sets/IGVFDS2074JWFW/, /measurement-sets/IGVFDS2972VXMB/, /measurement-sets/IGVFDS9915OTKB/, /measurement-sets/IGVFDS8050CYYG/, /measurement-sets/IGVFDS0471SKEE/, /measurement-sets/IGVFDS9126DKWW/, /measurement-sets/IGVFDS6229XAIE/, /measurement-sets/IGVFDS4823GFCR/, /measurement-sets/IGVFDS4736IKQS/, /measurement-sets/IGVFDS4670KYYZ/, /measurement-sets/IGVFDS8825HZQT/, /measurement-sets/IGVFDS2690TJJM/

THP-1 cell line, modified with CRISPR modifications, transfected with a guide library, sorted on expression of PPIF

/in-vitro-systems/IGVFSM7107DJSZ/, /in-vitro-systems/IGVFSM1683OFWB/, /in-vitro-systems/IGVFSM3771MMDC/, /in-vitro-systems/IGVFSM2837HWZC/, /in-vitro-systems/IGVFSM9885ZFLQ/, /in-vitro-systems/IGVFSM5553HMSC/, /in-vitro-systems/IGVFSM6320VUBH/, /in-vitro-systems/IGVFSM1488CZUU/, /in-vitro-systems/IGVFSM0841TQDY/, /in-vitro-systems/IGVFSM3035HZXX/, /in-vitro-systems/IGVFSM3264VOCP/, /in-vitro-systems/IGVFSM0894QRYX/, /in-vitro-systems/IGVFSM8585CWCE/, /in-vitro-systems/IGVFSM7227LRMC/, /in-vitro-systems/IGVFSM5729BNQM/, /in-vitro-systems/IGVFSM9725CVMG/, /in-vitro-systems/IGVFSM7460SNVF/, /in-vitro-systems/IGVFSM3467QAZR/, /in-vitro-systems/IGVFSM5143PODP/, /in-vitro-systems/IGVFSM0906STHP/, /in-vitro-systems/IGVFSM2185RMNT/, /in-vitro-systems/IGVFSM4866SSGO/, /in-vitro-systems/IGVFSM0686AMNU/, /in-vitro-systems/IGVFSM4531MGQB/, /in-vitro-systems/IGVFSM3794OZOG/, /in-vitro-systems/IGVFSM9470HNZI/, /in-vitro-systems/IGVFSM3275SABA/, /in-vitro-systems/IGVFSM8031DKZT/, /in-vitro-systems/IGVFSM4715APXQ/, /in-vitro-systems/IGVFSM9682FICS/, /in-vitro-systems/IGVFSM4653AWMR/, /in-vitro-systems/IGVFSM1367KBNP/, /in-vitro-systems/IGVFSM0450DIVA/, /in-vitro-systems/IGVFSM5444NCSW/, /in-vitro-systems/IGVFSM6331RKYX/, /in-vitro-systems/IGVFSM8646DYNI/, /in-vitro-systems/IGVFSM5040QPRO/, /in-vitro-systems/IGVFSM2310CCFV/, /in-vitro-systems/IGVFSM1664NEGX/, /in-vitro-systems/IGVFSM0040UFBQ/, /in-vitro-systems/IGVFSM5918TEKW/

released

prime editing Variant FlowFISH targeting PPIF: variant effects

Homo sapiens

a4d027f3-e6dc-4d35-b906-0fc85c2f018e