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principal analysis
2
experimental data
1
intermediate analysis
1
samples.@id
/primary-cells/IGVFSM6537MPGY/
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Taxa
UUID
/analysis-sets/IGVFDS9906UGWB/
IGVFDS9906UGWB
charles-gersbach:cd8-tcells-analysis-set-rna-seq-cas-ko-znf217
/awards/HG012053/
/human-donors/IGVFDO8565PQXZ/
,
/human-donors/IGVFDO7589UJKG/
,
/human-donors/IGVFDO4048LCOU/
principal analysis
/analysis-sets/IGVFDS4430NOFL/
,
/analysis-sets/IGVFDS6924DJJC/
/labs/charles-gersbach/
CD8-positive, alpha-beta memory T cell primary cell, modified with CRISPR modifications, transfected with a guide library
/primary-cells/IGVFSM1498WFCO/
,
/primary-cells/IGVFSM0383IKGE/
,
/primary-cells/IGVFSM5949AWIH/
,
/primary-cells/IGVFSM5367RVVU/
,
/primary-cells/IGVFSM1311HWOF/
,
/primary-cells/IGVFSM6537MPGY/
released
knockout RNA-seq: fold change over control, transcript quantifications
Homo sapiens
bd513393-12b9-40a3-b24f-d528d7f8dc24
/analysis-sets/IGVFDS6924DJJC/
IGVFDS6924DJJC
charles-gersbach:cd8-tcells-intermediate-analysis-rna-seq-cas-ko-nt
/awards/HG012053/
/human-donors/IGVFDO8565PQXZ/
,
/human-donors/IGVFDO7589UJKG/
,
/human-donors/IGVFDO4048LCOU/
intermediate analysis
/measurement-sets/IGVFDS4169BMPH/
,
/measurement-sets/IGVFDS6088VPGO/
,
/measurement-sets/IGVFDS9846EQXV/
/labs/charles-gersbach/
https://www.protocols.io/view/tfome-crisprko-screens-81wgbxk8olpk/v1
,
https://www.protocols.io/view/rnaseq-of-primary-human-t-cells-overexpressing-bat-c5pdy5i6
CD8-positive, alpha-beta memory T cell primary cell, modified with CRISPR modifications, transfected with a guide library
/primary-cells/IGVFSM0383IKGE/
,
/primary-cells/IGVFSM1498WFCO/
,
/primary-cells/IGVFSM6537MPGY/
released
knockout RNA-seq: transcriptome alignments
Homo sapiens
b8fbe5f7-2d40-453c-9c81-f4b616dab9ef
/measurement-sets/IGVFDS4169BMPH/
IGVFDS4169BMPH
charles-gersbach:cd8-tcells-rna-seq-cas-ko-nt-rep1
/assay-terms/OBI_0003090/
/awards/HG012053/
/human-donors/IGVFDO8565PQXZ/
experimental data
/labs/charles-gersbach/
RNA-seq
https://www.protocols.io/view/tfome-crisprko-screens-81wgbxk8olpk/v1
,
https://www.protocols.io/view/rnaseq-of-primary-human-t-cells-overexpressing-bat-c5pdy5i6
/primary-cells/IGVFSM6537MPGY/
released
CRISPR knockout RNA-seq integrating a guide (sgRNA) library targeting transcription start sites genome-wide
Homo sapiens
9ac68255-f0a0-4401-a018-6610a5d7d84f
/analysis-sets/IGVFDS7239LNZO/
IGVFDS7239LNZO
charles-gersbach:cd8-tcells-analysis-set-rna-seq-cas-ko-gata3
/awards/HG012053/
/human-donors/IGVFDO8565PQXZ/
,
/human-donors/IGVFDO7589UJKG/
,
/human-donors/IGVFDO4048LCOU/
principal analysis
/analysis-sets/IGVFDS0006MFFD/
,
/analysis-sets/IGVFDS6924DJJC/
/labs/charles-gersbach/
CD8-positive, alpha-beta memory T cell primary cell, modified with CRISPR modifications, transfected with a guide library
/primary-cells/IGVFSM7117ATUZ/
,
/primary-cells/IGVFSM0829UPAR/
,
/primary-cells/IGVFSM0383IKGE/
,
/primary-cells/IGVFSM9627TJZO/
,
/primary-cells/IGVFSM1498WFCO/
,
/primary-cells/IGVFSM6537MPGY/
released
knockout RNA-seq: fold change over control, transcript quantifications
Homo sapiens
88683a11-57fd-4f64-b2ff-4a7c3324e13c