IGVF

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File Set Type

experimental data
1
gRNA sequencing
1
principal analysis
1

/in-vitro-systems/IGVFSM8115WXZU/

3 items

/analysis-sets/IGVFDS9053MHCS/

IGVFDS9053MHCS

jesse-engreitz:analysis_set_eRZ10_teloHAEC_TLNRD1_enhancer_CRISPRi_FlowFISH_analysis

/awards/HG011972/

/human-donors/IGVFDO3459DFTW/

principal analysis

/measurement-sets/IGVFDS8529BNPK/, /measurement-sets/IGVFDS8329NAOV/, /measurement-sets/IGVFDS0071OLHI/, /measurement-sets/IGVFDS6709HOZL/, /measurement-sets/IGVFDS2367NFMX/, /measurement-sets/IGVFDS0882RKGQ/, /measurement-sets/IGVFDS8252XAWN/, /measurement-sets/IGVFDS6694UWZS/, /measurement-sets/IGVFDS8508PSMW/, /measurement-sets/IGVFDS3115BOGO/, /measurement-sets/IGVFDS4378DCUS/, /measurement-sets/IGVFDS9231LVGR/, /measurement-sets/IGVFDS1890YDYU/, /measurement-sets/IGVFDS2108LFDU/, /measurement-sets/IGVFDS0018LXFE/, /measurement-sets/IGVFDS2419JZMR/, /auxiliary-sets/IGVFDS0176EPZP/, /auxiliary-sets/IGVFDS2360YYBI/, /auxiliary-sets/IGVFDS4798IFBG/, /auxiliary-sets/IGVFDS1940YJWG/, /auxiliary-sets/IGVFDS5846AAXB/, /auxiliary-sets/IGVFDS7307RZZC/, /auxiliary-sets/IGVFDS6384XJTD/, /auxiliary-sets/IGVFDS6130NFHZ/, /auxiliary-sets/IGVFDS4347NQJP/, /auxiliary-sets/IGVFDS0127ALOS/, /auxiliary-sets/IGVFDS6271YGUP/, /auxiliary-sets/IGVFDS5117CMSR/, /auxiliary-sets/IGVFDS5333EUSF/, /auxiliary-sets/IGVFDS5244YZVE/, /auxiliary-sets/IGVFDS9830AWTI/, /auxiliary-sets/IGVFDS8749RHTV/

/labs/jesse-engreitz/

https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1

TeloHAEC cell line, modified with CRISPR modifications, transfected with a guide library, sorted on expression of TLNRD1

/in-vitro-systems/IGVFSM8115WXZU/, /in-vitro-systems/IGVFSM8121JQAK/, /in-vitro-systems/IGVFSM9750UXVD/, /in-vitro-systems/IGVFSM9054OJLH/, /in-vitro-systems/IGVFSM7319EZLZ/, /in-vitro-systems/IGVFSM2155YTIW/, /in-vitro-systems/IGVFSM7436UMQD/, /in-vitro-systems/IGVFSM3508ZAFL/, /in-vitro-systems/IGVFSM5424HTHI/, /in-vitro-systems/IGVFSM5826EWDE/, /in-vitro-systems/IGVFSM6467VTYE/, /in-vitro-systems/IGVFSM5229SOKC/, /in-vitro-systems/IGVFSM6823DARA/, /in-vitro-systems/IGVFSM0599MHTG/, /in-vitro-systems/IGVFSM6408QEFG/, /in-vitro-systems/IGVFSM2756NFXE/

released

CRISPR interference FlowFISH screen targeting TLNRD1

Homo sapiens

c38ce05d-b4a3-4d3e-bf38-b9c8828ef22e

/measurement-sets/IGVFDS2108LFDU/

IGVFDS2108LFDU

jesse-engreitz:measurement_set_eRZ10_teloHAEC_TLNRD1_enhancer_CRISPRi_FlowFISH_Rep4_bin2

TLNRD1

/assay-terms/OBI_0003661/

/awards/HG011972/

/human-donors/IGVFDO3459DFTW/

experimental data

/labs/jesse-engreitz/

CRISPR FlowFISH screen

https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1

/in-vitro-systems/IGVFSM8115WXZU/

released

CRISPR interference FlowFISH screen integrating a guide (sgRNA) library targeting candidate cis-regulatory elements in a genomic locus

Homo sapiens

99dd6fd3-263d-4f0e-b502-f487f4d823ef

/auxiliary-sets/IGVFDS5244YZVE/

IGVFDS5244YZVE

jesse-engreitz:auxiliary_set_eRZ10_teloHAEC_TLNRD1_enhancer_CRISPRi_FlowFISH_Rep4_bin2

/awards/HG011972/

/human-donors/IGVFDO3459DFTW/

gRNA sequencing

/labs/jesse-engreitz/

/measurement-sets/IGVFDS2108LFDU/

/in-vitro-systems/IGVFSM8115WXZU/

released

gRNA sequencing for CRISPR interference FlowFISH screen integrating a guide (sgRNA) library targeting candidate cis-regulatory elements in a genomic locus

Homo sapiens

3b5c2876-0e87-4c04-b07d-9b4674ed2ccd