IGVF

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Analysis Set Type

intermediate analysis
2

Assay Title

RNA-seq
2

Assembly

GRCh38
2

/analysis-sets/IGVFDS9906UGWB/

2 items

/analysis-sets/IGVFDS4430NOFL/

IGVFDS4430NOFL

charles-gersbach:cd8-tcells-intermediate-analysis-rna-seq-cas-ko-znf217

/awards/HG012053/

/human-donors/IGVFDO8565PQXZ/, /human-donors/IGVFDO7589UJKG/, /human-donors/IGVFDO4048LCOU/

intermediate analysis

/measurement-sets/IGVFDS3760HQCL/, /measurement-sets/IGVFDS4636NLRL/, /measurement-sets/IGVFDS3198NMHN/

/labs/charles-gersbach/

https://www.protocols.io/view/tfome-crisprko-screens-81wgbxk8olpk/v1, https://www.protocols.io/view/rnaseq-of-primary-human-t-cells-overexpressing-bat-c5pdy5i6

CD8-positive, alpha-beta memory T cell primary cell, modified with CRISPR modifications, transfected with a guide library

/primary-cells/IGVFSM1311HWOF/, /primary-cells/IGVFSM5367RVVU/, /primary-cells/IGVFSM5949AWIH/

released

knockout RNA-seq: transcriptome alignments

Homo sapiens

dff2d881-73ed-413d-888f-11c0015c09cd

/analysis-sets/IGVFDS6924DJJC/

IGVFDS6924DJJC

charles-gersbach:cd8-tcells-intermediate-analysis-rna-seq-cas-ko-nt

/awards/HG012053/

/human-donors/IGVFDO8565PQXZ/, /human-donors/IGVFDO7589UJKG/, /human-donors/IGVFDO4048LCOU/

intermediate analysis

/measurement-sets/IGVFDS4169BMPH/, /measurement-sets/IGVFDS6088VPGO/, /measurement-sets/IGVFDS9846EQXV/

/labs/charles-gersbach/

https://www.protocols.io/view/tfome-crisprko-screens-81wgbxk8olpk/v1, https://www.protocols.io/view/rnaseq-of-primary-human-t-cells-overexpressing-bat-c5pdy5i6

CD8-positive, alpha-beta memory T cell primary cell, modified with CRISPR modifications, transfected with a guide library

/primary-cells/IGVFSM0383IKGE/, /primary-cells/IGVFSM1498WFCO/, /primary-cells/IGVFSM6537MPGY/

released

knockout RNA-seq: transcriptome alignments

Homo sapiens

b8fbe5f7-2d40-453c-9c81-f4b616dab9ef