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MeasurementSet
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Assay
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in vitro CRISPR screen using flow cytometry
41
Preferred Assay Title
All
None
Variant-EFFECTS
41
Control Type
All
None
unsorted FACS input
8
untransfected
1
Construct Library Data
All
None
guide library
40
Readout Genes
All
None
PPIF
32
Sequencing Platform
All
None
Illumina NextSeq 550
41
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/analysis-sets/IGVFDS3423PSID/
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Taxa
UUID
/measurement-sets/IGVFDS5733FUWG/
IGVFDS5733FUWG
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-FACS_Input_AmpliconSequencing
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM3818KKHR/
released
unsorted FACS input CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
f486be14-7db1-405b-83b7-d2dde6643084
/measurement-sets/IGVFDS8356GTHO/
IGVFDS8356GTHO
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep1-BinD_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM9715TWHE/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
f2163f4b-b67b-45d3-ab31-c5171b60b5ab
/measurement-sets/IGVFDS1327XCCU/
IGVFDS1327XCCU
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep3-BinA_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM5844KEUJ/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
e9fc1daf-59f0-47b4-bf37-4cb520190d19
/measurement-sets/IGVFDS7403HHLV/
IGVFDS7403HHLV
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep2-BinC_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM4383GTZM/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
e0bd4ba1-42ff-4e27-8046-6193ef27b766
/measurement-sets/IGVFDS4745BLLN/
IGVFDS4745BLLN
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep2-FACS_Input_AmpliconSequencing
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM5150FUTV/
released
unsorted FACS input CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
d5238b94-8b3a-4dfb-8e10-0e583e1a86d4
/measurement-sets/IGVFDS5699JBLV/
IGVFDS5699JBLV
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-BinC_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM4853BCZC/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
ccdaef89-94d9-4c10-b7cb-1153308374ae
/measurement-sets/IGVFDS1674OUCP/
IGVFDS1674OUCP
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep2-BinB_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM5175SJIS/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
c77529f8-ec2c-48e2-ae55-87aad932b827
/measurement-sets/IGVFDS8517SHZG/
IGVFDS8517SHZG
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep2-BinC_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM8427KPPU/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
c72d068b-98e8-4a24-adaf-7c5879e3c53b
/measurement-sets/IGVFDS8631OYNB/
IGVFDS8631OYNB
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep2-FACS_Input_AmpliconSequencing
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM9365FWZA/
released
unsorted FACS input CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
c394716c-b10b-4839-bf1d-9ce264d60ffd
/measurement-sets/IGVFDS4715UUNW/
IGVFDS4715UUNW
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-BinB_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM6465SGTZ/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
c347f985-d209-45b2-9862-928f792992b9
/measurement-sets/IGVFDS9665GYVE/
IGVFDS9665GYVE
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinC_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM6463YBYJ/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
bdc26c18-93a6-41ca-b77c-dd78763a8e0a
/measurement-sets/IGVFDS6267YRNH/
IGVFDS6267YRNH
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep3-BinD_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM3394FCPH/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
bced11bd-f79f-4dbe-be46-346aaddffe0f
/measurement-sets/IGVFDS3532HUSQ/
IGVFDS3532HUSQ
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-BinD_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM6349GRPM/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
b04f2097-2568-42fe-8a02-f703247ea289
/measurement-sets/IGVFDS8290UELV/
IGVFDS8290UELV
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep2-BinA_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM3965ATNS/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
a9e4b271-8c21-4db5-953d-8dde501e73a8
/measurement-sets/IGVFDS0403DJHI/
IGVFDS0403DJHI
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep1-BinB_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM7954ICIY/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
a9c2885f-658e-4a77-bb45-39922aa5fa1d
/measurement-sets/IGVFDS0744DITV/
IGVFDS0744DITV
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-BinA_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM4599PEWQ/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
a5b47e31-7e20-43e5-9664-ba4c7d387bb8
/measurement-sets/IGVFDS3537WUVG/
IGVFDS3537WUVG
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep3-FACS_Input_AmpliconSequencing
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM4195NXPO/
released
unsorted FACS input CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
a5026eae-58c6-424e-8eab-3683d3750fd8
/measurement-sets/IGVFDS6622DPIT/
IGVFDS6622DPIT
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep1-BinB_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM0143XZGF/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
9a90c2e2-0b93-4c18-9115-d3fa96d61696
/measurement-sets/IGVFDS1402WRSD/
IGVFDS1402WRSD
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep1-BinA_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM4125CFFV/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
99ba73dd-46fa-4286-b8bf-52433d3427ba
/measurement-sets/IGVFDS8801DBGC/
IGVFDS8801DBGC
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep2-BinB_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM9821NUGZ/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
981ac8f9-800b-4859-bf5c-e65dc3a68176
/measurement-sets/IGVFDS8854UNCC/
IGVFDS8854UNCC
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinD_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM0996COAP/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
977878ca-40eb-4d59-b146-98fc9806fcbc
/measurement-sets/IGVFDS0629YEMD/
IGVFDS0629YEMD
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-FACS_Input_AmpliconSequencing
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM6276DPKS/
released
unsorted FACS input CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
900eb589-eb3b-4cfc-81b2-9eaf7555b6b0
/measurement-sets/IGVFDS7791SSYA/
IGVFDS7791SSYA
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep1-BinC_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM8306UJIK/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
8e998d76-8027-4694-8050-b9815a5e9652
/measurement-sets/IGVFDS6551IWAB/
IGVFDS6551IWAB
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-BinA_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM5332OJBP/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
7f268ade-8659-48f4-9923-24c5bffaa753
/measurement-sets/IGVFDS3226EEYN/
IGVFDS3226EEYN
jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-BinD_AmpliconSequencing
PPIF
/assay-terms/OBI_0003661/
/awards/HG011972/
/human-donors/IGVFDO7359LVPI/
experimental data
/labs/jesse-engreitz/
Variant-EFFECTS
https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1
/in-vitro-systems/IGVFSM1276SAGC/
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
7c89c6c1-e288-42ac-a0e4-f5b6c8777f1c