IGVF

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Assay

bulk assay for transposase-accessible chromatin using sequencing
3

Preferred Assay Title

ATAC-seq
3

Construct Library Data

expression vector library
3

Investigated Gene

BATF3
3

Sequencing Platform

Illumina NextSeq 2000
3

input_for

/analysis-sets/IGVFDS1013MILB/

3 items

/measurement-sets/IGVFDS1619VKNB/

IGVFDS1619VKNB

charles-gersbach:cd8-tcells-atac-seq-acute-activation-batf3-rep1

/assay-terms/OBI_0003089/

/awards/HG012053/

/human-donors/IGVFDO9588OERW/

experimental data

/labs/charles-gersbach/

ATAC-seq

https://www.protocols.io/view/atac-seq-primary-human-t-cells-overexpressing-batf-c5pfy5jn

/primary-cells/IGVFSM0066TACG/

released

ATAC-seq integrating an expression vector library of BATF3

Homo sapiens

fac6ae1a-55ce-44cc-879c-2b167fb2ff8d

/measurement-sets/IGVFDS2737CQNK/

IGVFDS2737CQNK

charles-gersbach:cd8-tcells-atac-seq-acute-activation-batf3-rep2

/assay-terms/OBI_0003089/

/awards/HG012053/

/human-donors/IGVFDO1522NSLA/

experimental data

/labs/charles-gersbach/

ATAC-seq

https://www.protocols.io/view/atac-seq-primary-human-t-cells-overexpressing-batf-c5pfy5jn

/primary-cells/IGVFSM4716FORO/

released

ATAC-seq integrating an expression vector library of BATF3

Homo sapiens

d286d9b9-6e44-4ee7-a965-69c9e010671c

/measurement-sets/IGVFDS5292QYYE/

IGVFDS5292QYYE

charles-gersbach:cd8-tcells-atac-seq-acute-activation-batf3-rep3

/assay-terms/OBI_0003089/

/awards/HG012053/

/human-donors/IGVFDO8289ZMDD/

experimental data

/labs/charles-gersbach/

ATAC-seq

https://www.protocols.io/view/atac-seq-primary-human-t-cells-overexpressing-batf-c5pfy5jn

/primary-cells/IGVFSM0293OVAT/

released

ATAC-seq integrating an expression vector library of BATF3

Homo sapiens

234ce435-1110-4b80-b64e-562e29725bdc