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IGVFDS9953SGYZ

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 177)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 427
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

36 items
Read Names
fastq
reads
R2
9031
Read 2
22LMVNLT4
2.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8935
Read 2
22LMVNLT4
2.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8743
Read 1
22LMVNLT4
2.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8743
Read 2
22LMVNLT4
2.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8839
Read 1
22LMVNLT4
2.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8551
Read 1
22LMVNLT4
2.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9031
Barcode index
22LMVNLT4
1.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8647
Read 2
22LMVNLT4
2.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
3906
Barcode index
22523KLT3
1.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8647
Barcode index
22LMVNLT4
1.3 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 177)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 258
Jason Buenrostro, Broad