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IGVFDS9774FVTL

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 4), female, Homo sapiens (19 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 20
buenrostro-bernstein:scATAC Lib 20

Sequencing Results (Illumina)

16 items
fastq
reads
R2
2371
696 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2563
688 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2275
693 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1605
1.8 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1509
1.1 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1413
1.1 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2467
411 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1605
1.1 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1701
1.1 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1509
2.0 KB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 4), female, Homo sapiens (19 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1508
  • buenrostro-bernstein:Donor 1508
female
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 20
  • buenrostro-bernstein:scRNA Lib 20
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad