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IGVFDS9664AFSO

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 205)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 588
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

21 items
Read Names
fastq
reads
R2
1044
Read 2
22773CLT3
246 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
960
Read 2
22773CLT3
241 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
1044
Barcode index
22773CLT3
268 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1044
Read 1
22773CLT3
554 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1086
Read 2
22773CLT3
247 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
960
Barcode index
22773CLT3
265 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4030
Read 2
22523KLT3
251 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4102
Barcode index
22523KLT3
267 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4030
Barcode index
22523KLT3
264 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4066
Barcode index
22523KLT3
266 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 205)

Donors

99 items
Aliases
  • buenrostro-bernstein:Donor 1943
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1909
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1937
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1907
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1963
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1952
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1946
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1982
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1975
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 457
Jason Buenrostro, Broad