{
"@context": "/terms/",
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],
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],
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},
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{
"category": "missing publication",
"detail": "In vitro system [IGVFSM7296NMXX](/in-vitro-systems/IGVFSM7296NMXX/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
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},
{
"category": "missing publication",
"detail": "Measurement set [IGVFDS9664AFSO](/measurement-sets/IGVFDS9664AFSO/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_file_set_missing_publication",
"path": "/measurement-sets/IGVFDS9664AFSO/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS9664AFSO](/measurement-sets/IGVFDS9664AFSO/) has in progress subobject tabular file [IGVFFI5875LDWP](/tabular-files/IGVFFI5875LDWP/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS9664AFSO/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS9664AFSO](/measurement-sets/IGVFDS9664AFSO/) has in progress subobject tabular file [IGVFFI0400MBIM](/tabular-files/IGVFFI0400MBIM/).",
"level": 30,
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"path": "/measurement-sets/IGVFDS9664AFSO/"
}
],
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{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS9664AFSO](/measurement-sets/IGVFDS9664AFSO/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS9664AFSO/"
}
]
},
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"contact_pi": {
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"title": "Jason Buenrostro"
},
"title": "A foundational resource of functional elements, TF footprints and gene regulatory interactions"
},
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"creation_timestamp": "2024-08-20T14:58:27.561429+00:00",
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},
{
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{
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{
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{
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},
{
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{
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},
{
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},
{
"@id": "/human-donors/IGVFDO3560WDAC/",
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},
{
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},
{
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{
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},
{
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},
{
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{
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},
{
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{
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{
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{
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{
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{
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{
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{
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"taxa": "Homo sapiens"
},
{
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},
{
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},
{
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{
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{
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{
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{
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{
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{
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{
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},
{
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{
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{
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},
{
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},
{
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},
{
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},
{
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},
{
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},
{
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},
{
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},
{
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},
{
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},
{
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},
{
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},
{
"@id": "/human-donors/IGVFDO8124AYVF/",
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},
{
"@id": "/human-donors/IGVFDO3469EFJR/",
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{
"@id": "/human-donors/IGVFDO4449DKJZ/",
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{
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},
{
"@id": "/human-donors/IGVFDO9907ZZVD/",
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},
{
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5249VKYA/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5920NCRK/",
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"taxa": "Homo sapiens"
},
{
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7991MYZO/",
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},
{
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"sex": "unspecified",
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"taxa": "Homo sapiens"
},
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],
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{
"@id": "/sample-terms/EFO_0004905/",
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"summary": "induced pluripotent stem cell",
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"title": "Siddarth Wekhande"
},
"submitted_files_timestamp": "2024-08-20T15:09:21.203376+00:00",
"summary": "single-cell ATAC-seq (SHARE-seq)",
"uuid": "dbc49ec8-a73d-41de-964b-4cc69987d2a0"
}