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IGVFDS8985STGT

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 170)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 385
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

12 items
Read Names
fastq
reads
I1
3896
Barcode index
22523KLT3
434 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4345
Barcode index
H75F7DSX5
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
3860
Read 1
22523KLT3
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4381
Barcode index
H75F7DSX5
998 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4381
Read 2
H75F7DSX5
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4345
Read 1
H75F7DSX5
2.7 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
3860
Read 2
22523KLT3
503 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
3896
Read 1
22523KLT3
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
3896
Read 2
22523KLT3
501 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4345
Read 2
H75F7DSX5
1.2 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 170)

Donors

89 items
Aliases
  • buenrostro-bernstein:Donor 1719
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1735
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1681
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1665
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1663
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1661
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1675
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1694
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1668
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 264
Jason Buenrostro, Broad