IGVFDS8985STGT

1{
2    "@context": "/terms/",
3    "@id": "/measurement-sets/IGVFDS8985STGT/",
4    "@type": [
5        "MeasurementSet",
6        "FileSet",
7        "Item"
8    ],
9    "accession": "IGVFDS8985STGT",
10    "aliases": [
11        "buenrostro-bernstein:scATAC Lib 385"
12    ],
13    "assay_term": {
14        "@id": "/assay-terms/OBI_0002764/",
15        "assay_slims": [
16            "chromatin accessibility"
17        ],
18        "status": "released",
19        "term_name": "single-cell ATAC-seq"
20    },
21    "audit": {
22        "INTERNAL_ACTION": [
23            {
24                "category": "missing publication",
25                "detail": "Measurement set [IGVFDS8985STGT](/measurement-sets/IGVFDS8985STGT/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
26                "level": 30,
27                "level_name": "INTERNAL_ACTION",
28                "name": "audit_file_set_missing_publication",
29                "path": "/measurement-sets/IGVFDS8985STGT/"
30            },
31            {
32                "category": "mismatched status",
33                "detail": "Released measurement set [IGVFDS8985STGT](/measurement-sets/IGVFDS8985STGT/) has in progress subobject tabular file [IGVFFI0400MBIM](/tabular-files/IGVFFI0400MBIM/).",
34                "level": 30,
35                "level_name": "INTERNAL_ACTION",
36                "name": "audit_item_status",
37                "path": "/measurement-sets/IGVFDS8985STGT/"
38            },
39            {
40                "category": "mismatched status",
41                "detail": "Released measurement set [IGVFDS8985STGT](/measurement-sets/IGVFDS8985STGT/) has in progress subobject tabular file [IGVFFI5586QIXE](/tabular-files/IGVFFI5586QIXE/).",
42                "level": 30,
43                "level_name": "INTERNAL_ACTION",
44                "name": "audit_item_status",
45                "path": "/measurement-sets/IGVFDS8985STGT/"
46            },
47            {
48                "category": "missing publication",
49                "detail": "In vitro system [IGVFSM2575EALO](/in-vitro-systems/IGVFSM2575EALO/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
50                "level": 30,
51                "level_name": "INTERNAL_ACTION",
52                "name": "audit_sample_missing_publication",
53                "path": "/in-vitro-systems/IGVFSM2575EALO/"
54            }
55        ]
56    },
57    "award": {
58        "@id": "/awards/HG011986/",
59        "component": "mapping",
60        "contact_pi": {
61            "@id": "/users/33c6eb70-e143-4f77-9661-4b3905737daa/",
62            "title": "Jason Buenrostro"
63        },
64        "title": "A foundational resource of functional elements, TF footprints and gene regulatory interactions"
65    },
66    "control_for": [],
67    "controlled_access": true,
68    "creation_timestamp": "2024-08-20T14:58:40.856404+00:00",
69    "data_use_limitation_summaries": [
70        "GRU"
71    ],
72    "donors": [
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75            "accession": "IGVFDO3222ZPKA",
76            "aliases": [
77                "buenrostro-bernstein:Donor 1732"
78            ],
79            "sex": "unspecified",
80            "status": "released",
81            "taxa": "Homo sapiens"
82        },
83        {
84            "@id": "/human-donors/IGVFDO6420BUOT/",
85            "accession": "IGVFDO6420BUOT",
86            "aliases": [
87                "buenrostro-bernstein:Donor 1687"
88            ],
89            "sex": "unspecified",
90            "status": "released",
91            "taxa": "Homo sapiens"
92        },
93        {
94            "@id": "/human-donors/IGVFDO5614SKSA/",
95            "accession": "IGVFDO5614SKSA",
96            "aliases": [
97                "buenrostro-bernstein:Donor 1729"
98            ],
99            "sex": "unspecified",
100            "status": "released",
101            "taxa": "Homo sapiens"
102        },
103        {
104            "@id": "/human-donors/IGVFDO8910GBTE/",
105            "accession": "IGVFDO8910GBTE",
106            "aliases": [
107                "buenrostro-bernstein:Donor 1734"
108            ],
109            "sex": "unspecified",
110            "status": "released",
111            "taxa": "Homo sapiens"
112        },
113        {
114            "@id": "/human-donors/IGVFDO4380OVNW/",
115            "accession": "IGVFDO4380OVNW",
116            "aliases": [
117                "buenrostro-bernstein:Donor 1713"
118            ],
119            "sex": "unspecified",
120            "status": "released",
121            "taxa": "Homo sapiens"
122        },
123        {
124            "@id": "/human-donors/IGVFDO4448APZX/",
125            "accession": "IGVFDO4448APZX",
126            "aliases": [
127                "buenrostro-bernstein:Donor 1703"
128            ],
129            "sex": "unspecified",
130            "status": "released",
131            "taxa": "Homo sapiens"
132        },
133        {
134            "@id": "/human-donors/IGVFDO1296IFXP/",
135            "accession": "IGVFDO1296IFXP",
136            "aliases": [
137                "buenrostro-bernstein:Donor 1682"
138            ],
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140            "status": "released",
141            "taxa": "Homo sapiens"
142        },
143        {
144            "@id": "/human-donors/IGVFDO9555ARCU/",
145            "accession": "IGVFDO9555ARCU",
146            "aliases": [
147                "buenrostro-bernstein:Donor 1684"
148            ],
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151            "taxa": "Homo sapiens"
152        },
153        {
154            "@id": "/human-donors/IGVFDO1867CNFN/",
155            "accession": "IGVFDO1867CNFN",
156            "aliases": [
157                "buenrostro-bernstein:Donor 1680"
158            ],
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160            "status": "released",
161            "taxa": "Homo sapiens"
162        },
163        {
164            "@id": "/human-donors/IGVFDO5142SUYF/",
165            "accession": "IGVFDO5142SUYF",
166            "aliases": [
167                "buenrostro-bernstein:Donor 1690"
168            ],
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170            "status": "released",
171            "taxa": "Homo sapiens"
172        },
173        {
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175            "accession": "IGVFDO7730CFCO",
176            "aliases": [
177                "buenrostro-bernstein:Donor 1678"
178            ],
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180            "status": "released",
181            "taxa": "Homo sapiens"
182        },
183        {
184            "@id": "/human-donors/IGVFDO2287CVZF/",
185            "accession": "IGVFDO2287CVZF",
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187                "buenrostro-bernstein:Donor 1708"
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190            "status": "released",
191            "taxa": "Homo sapiens"
192        },
193        {
194            "@id": "/human-donors/IGVFDO8979DYIF/",
195            "accession": "IGVFDO8979DYIF",
196            "aliases": [
197                "buenrostro-bernstein:Donor 1743"
198            ],
199            "sex": "unspecified",
200            "status": "released",
201            "taxa": "Homo sapiens"
202        },
203        {
204            "@id": "/human-donors/IGVFDO0554TWWH/",
205            "accession": "IGVFDO0554TWWH",
206            "aliases": [
207                "buenrostro-bernstein:Donor 1663"
208            ],
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210            "status": "released",
211            "taxa": "Homo sapiens"
212        },
213        {
214            "@id": "/human-donors/IGVFDO7138YKKN/",
215            "accession": "IGVFDO7138YKKN",
216            "aliases": [
217                "buenrostro-bernstein:Donor 1692"
218            ],
219            "sex": "unspecified",
220            "status": "released",
221            "taxa": "Homo sapiens"
222        },
223        {
224            "@id": "/human-donors/IGVFDO2860VILP/",
225            "accession": "IGVFDO2860VILP",
226            "aliases": [
227                "buenrostro-bernstein:Donor 1666"
228            ],
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230            "status": "released",
231            "taxa": "Homo sapiens"
232        },
233        {
234            "@id": "/human-donors/IGVFDO3402AXNZ/",
235            "accession": "IGVFDO3402AXNZ",
236            "aliases": [
237                "buenrostro-bernstein:Donor 1664"
238            ],
239            "sex": "unspecified",
240            "status": "released",
241            "taxa": "Homo sapiens"
242        },
243        {
244            "@id": "/human-donors/IGVFDO8623DFZV/",
245            "accession": "IGVFDO8623DFZV",
246            "aliases": [
247                "buenrostro-bernstein:Donor 1689"
248            ],
249            "sex": "unspecified",
250            "status": "released",
251            "taxa": "Homo sapiens"
252        },
253        {
254            "@id": "/human-donors/IGVFDO2149LCYH/",
255            "accession": "IGVFDO2149LCYH",
256            "aliases": [
257                "buenrostro-bernstein:Donor 1724"
258            ],
259            "sex": "unspecified",
260            "status": "released",
261            "taxa": "Homo sapiens"
262        },
263        {
264            "@id": "/human-donors/IGVFDO3469EFJR/",
265            "accession": "IGVFDO3469EFJR",
266            "aliases": [
267                "buenrostro-bernstein:Donor 1741"
268            ],
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270            "status": "released",
271            "taxa": "Homo sapiens"
272        },
273        {
274            "@id": "/human-donors/IGVFDO6126AWVH/",
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277                "buenrostro-bernstein:Donor 1686"
278            ],
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281            "taxa": "Homo sapiens"
282        },
283        {
284            "@id": "/human-donors/IGVFDO8425CFJW/",
285            "accession": "IGVFDO8425CFJW",
286            "aliases": [
287                "buenrostro-bernstein:Donor 1717"
288            ],
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290            "status": "released",
291            "taxa": "Homo sapiens"
292        },
293        {
294            "@id": "/human-donors/IGVFDO2216WEMV/",
295            "accession": "IGVFDO2216WEMV",
296            "aliases": [
297                "buenrostro-bernstein:Donor 1715"
298            ],
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301            "taxa": "Homo sapiens"
302        },
303        {
304            "@id": "/human-donors/IGVFDO4535IABG/",
305            "accession": "IGVFDO4535IABG",
306            "aliases": [
307                "buenrostro-bernstein:Donor 1701"
308            ],
309            "sex": "unspecified",
310            "status": "released",
311            "taxa": "Homo sapiens"
312        },
313        {
314            "@id": "/human-donors/IGVFDO6890GTBA/",
315            "accession": "IGVFDO6890GTBA",
316            "aliases": [
317                "buenrostro-bernstein:Donor 1671"
318            ],
319            "sex": "unspecified",
320            "status": "released",
321            "taxa": "Homo sapiens"
322        },
323        {
324            "@id": "/human-donors/IGVFDO1982MZWK/",
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326            "aliases": [
327                "buenrostro-bernstein:Donor 1738"
328            ],
329            "sex": "unspecified",
330            "status": "released",
331            "taxa": "Homo sapiens"
332        },
333        {
334            "@id": "/human-donors/IGVFDO2537BYJQ/",
335            "accession": "IGVFDO2537BYJQ",
336            "aliases": [
337                "buenrostro-bernstein:Donor 1699"
338            ],
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340            "status": "released",
341            "taxa": "Homo sapiens"
342        },
343        {
344            "@id": "/human-donors/IGVFDO4448MNLF/",
345            "accession": "IGVFDO4448MNLF",
346            "aliases": [
347                "buenrostro-bernstein:Donor 1696"
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349            "sex": "unspecified",
350            "status": "released",
351            "taxa": "Homo sapiens"
352        },
353        {
354            "@id": "/human-donors/IGVFDO2649JQXX/",
355            "accession": "IGVFDO2649JQXX",
356            "aliases": [
357                "buenrostro-bernstein:Donor 1659"
358            ],
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360            "status": "released",
361            "taxa": "Homo sapiens"
362        },
363        {
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366            "aliases": [
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370            "status": "released",
371            "taxa": "Homo sapiens"
372        },
373        {
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375            "accession": "IGVFDO6875RNLP",
376            "aliases": [
377                "buenrostro-bernstein:Donor 1716"
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380            "status": "released",
381            "taxa": "Homo sapiens"
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383        {
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386            "aliases": [
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391            "taxa": "Homo sapiens"
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396            "aliases": [
397                "buenrostro-bernstein:Donor 1737"
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400            "status": "released",
401            "taxa": "Homo sapiens"
402        },
403        {
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406            "aliases": [
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408            ],
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410            "status": "released",
411            "taxa": "Homo sapiens"
412        },
413        {
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415            "accession": "IGVFDO1533MKVB",
416            "aliases": [
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420            "status": "released",
421            "taxa": "Homo sapiens"
422        },
423        {
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426            "aliases": [
427                "buenrostro-bernstein:Donor 1668"
428            ],
429            "sex": "unspecified",
430            "status": "released",
431            "taxa": "Homo sapiens"
432        },
433        {
434            "@id": "/human-donors/IGVFDO7165KOCS/",
435            "accession": "IGVFDO7165KOCS",
436            "aliases": [
437                "buenrostro-bernstein:Donor 1683"
438            ],
439            "sex": "unspecified",
440            "status": "released",
441            "taxa": "Homo sapiens"
442        },
443        {
444            "@id": "/human-donors/IGVFDO4534QGFO/",
445            "accession": "IGVFDO4534QGFO",
446            "aliases": [
447                "buenrostro-bernstein:Donor 1691"
448            ],
449            "sex": "unspecified",
450            "status": "released",
451            "taxa": "Homo sapiens"
452        },
453        {
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456            "aliases": [
457                "buenrostro-bernstein:Donor 1721"
458            ],
459            "sex": "unspecified",
460            "status": "released",
461            "taxa": "Homo sapiens"
462        },
463        {
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465            "accession": "IGVFDO9672RNCH",
466            "aliases": [
467                "buenrostro-bernstein:Donor 1688"
468            ],
469            "sex": "unspecified",
470            "status": "released",
471            "taxa": "Homo sapiens"
472        },
473        {
474            "@id": "/human-donors/IGVFDO9375TNMP/",
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476            "aliases": [
477                "buenrostro-bernstein:Donor 1693"
478            ],
479            "sex": "unspecified",
480            "status": "released",
481            "taxa": "Homo sapiens"
482        },
483        {
484            "@id": "/human-donors/IGVFDO0533MSQJ/",
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486            "aliases": [
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488            ],
489            "sex": "unspecified",
490            "status": "released",
491            "taxa": "Homo sapiens"
492        },
493        {
494            "@id": "/human-donors/IGVFDO3742QYPD/",
495            "accession": "IGVFDO3742QYPD",
496            "aliases": [
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498            ],
499            "sex": "unspecified",
500            "status": "released",
501            "taxa": "Homo sapiens"
502        },
503        {
504            "@id": "/human-donors/IGVFDO5062VEQA/",
505            "accession": "IGVFDO5062VEQA",
506            "aliases": [
507                "buenrostro-bernstein:Donor 1679"
508            ],
509            "sex": "unspecified",
510            "status": "released",
511            "taxa": "Homo sapiens"
512        },
513        {
514            "@id": "/human-donors/IGVFDO3034QOTF/",
515            "accession": "IGVFDO3034QOTF",
516            "aliases": [
517                "buenrostro-bernstein:Donor 1720"
518            ],
519            "sex": "unspecified",
520            "status": "released",
521            "taxa": "Homo sapiens"
522        },
523        {
524            "@id": "/human-donors/IGVFDO1234AAAE/",
525            "accession": "IGVFDO1234AAAE",
526            "aliases": [
527                "buenrostro-bernstein:Donor 1673"
528            ],
529            "sex": "unspecified",
530            "status": "released",
531            "taxa": "Homo sapiens"
532        },
533        {
534            "@id": "/human-donors/IGVFDO7528UJWM/",
535            "accession": "IGVFDO7528UJWM",
536            "aliases": [
537                "buenrostro-bernstein:Donor 1697"
538            ],
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540            "status": "released",
541            "taxa": "Homo sapiens"
542        },
543        {
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546            "aliases": [
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548            ],
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550            "status": "released",
551            "taxa": "Homo sapiens"
552        },
553        {
554            "@id": "/human-donors/IGVFDO8124AYVF/",
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556            "aliases": [
557                "buenrostro-bernstein:Donor 1740"
558            ],
559            "sex": "unspecified",
560            "status": "released",
561            "taxa": "Homo sapiens"
562        },
563        {
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565            "accession": "IGVFDO2402XWOB",
566            "aliases": [
567                "buenrostro-bernstein:Donor 1704"
568            ],
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570            "status": "released",
571            "taxa": "Homo sapiens"
572        },
573        {
574            "@id": "/human-donors/IGVFDO4376OYXM/",
575            "accession": "IGVFDO4376OYXM",
576            "aliases": [
577                "buenrostro-bernstein:Donor 1669"
578            ],
579            "sex": "unspecified",
580            "status": "released",
581            "taxa": "Homo sapiens"
582        },
583        {
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586            "aliases": [
587                "buenrostro-bernstein:Donor 1675"
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590            "status": "released",
591            "taxa": "Homo sapiens"
592        },
593        {
594            "@id": "/human-donors/IGVFDO0823IGCQ/",
595            "accession": "IGVFDO0823IGCQ",
596            "aliases": [
597                "buenrostro-bernstein:Donor 1694"
598            ],
599            "sex": "unspecified",
600            "status": "released",
601            "taxa": "Homo sapiens"
602        },
603        {
604            "@id": "/human-donors/IGVFDO4062HKSZ/",
605            "accession": "IGVFDO4062HKSZ",
606            "aliases": [
607                "buenrostro-bernstein:Donor 1695"
608            ],
609            "sex": "unspecified",
610            "status": "released",
611            "taxa": "Homo sapiens"
612        },
613        {
614            "@id": "/human-donors/IGVFDO1173NZNR/",
615            "accession": "IGVFDO1173NZNR",
616            "aliases": [
617                "buenrostro-bernstein:Donor 1725"
618            ],
619            "sex": "unspecified",
620            "status": "released",
621            "taxa": "Homo sapiens"
622        },
623        {
624            "@id": "/human-donors/IGVFDO0436YOXD/",
625            "accession": "IGVFDO0436YOXD",
626            "aliases": [
627                "buenrostro-bernstein:Donor 1745"
628            ],
629            "sex": "unspecified",
630            "status": "released",
631            "taxa": "Homo sapiens"
632        },
633        {
634            "@id": "/human-donors/IGVFDO1499NRJY/",
635            "accession": "IGVFDO1499NRJY",
636            "aliases": [
637                "buenrostro-bernstein:Donor 1676"
638            ],
639            "sex": "unspecified",
640            "status": "released",
641            "taxa": "Homo sapiens"
642        },
643        {
644            "@id": "/human-donors/IGVFDO2874TLHM/",
645            "accession": "IGVFDO2874TLHM",
646            "aliases": [
647                "buenrostro-bernstein:Donor 1706"
648            ],
649            "sex": "unspecified",
650            "status": "released",
651            "taxa": "Homo sapiens"
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1467                },
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1502                        "OntologyTerm",
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1524        "title": "Siddarth Wekhande"
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1529}