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IGVFDS8938MFTZ

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 1), male, Homo sapiens (29 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 5
buenrostro-bernstein:scATAC Lib 5

Sequencing Results (Illumina)

16 items
fastq
reads
R1
2245
583 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2533
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2437
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1575
65 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2341
591 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2341
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1671
53 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1479
57 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1479
123 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1671
118 KB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 1), male, Homo sapiens (29 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1510
  • buenrostro-bernstein:Donor 1510
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 5
  • buenrostro-bernstein:scRNA Lib 5
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad