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IGVFDS8905OYNA

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 3), male, Homo sapiens (29 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 15
buenrostro-bernstein:scATAC Lib 15

Sequencing Results (Illumina)

16 items
fastq
reads
R1
1499
1.4 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1595
1.5 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2553
658 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1595
893 B
Jason Buenrostro, Broad
validated
fastq
reads
R2
1691
3.8 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2457
661 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2457
385 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2265
662 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2553
383 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1403
914 B
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 3), male, Homo sapiens (29 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1509
  • buenrostro-bernstein:Donor 1509
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 15
  • buenrostro-bernstein:scRNA Lib 15
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad