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IGVFDS8726KDVX

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 173)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 403
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

33 items
Read Names
fastq
reads
R2
8827
Read 2
22LMVNLT4
485 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8731
Barcode index
22LMVNLT4
288 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8635
Read 1
22LMVNLT4
501 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8923
Barcode index
22LMVNLT4
275 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4078
Read 1
22523KLT3
927 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8635
Read 2
22LMVNLT4
486 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9019
Barcode index
22LMVNLT4
285 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9019
Read 2
22LMVNLT4
473 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8443
Barcode index
22LMVNLT4
297 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4006
Barcode index
22523KLT3
376 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 173)

Donors

89 items
Aliases
  • buenrostro-bernstein:Donor 1719
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1735
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1681
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1665
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1663
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1661
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1675
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1694
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1668
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 358
Jason Buenrostro, Broad