IGVFDS7635GZJI

released

File Set Type

experimental data

Summary

single-cell ATAC-seq (SHARE-seq)

Assay Term

single-cell ATAC-seq

Sample Summaries

Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 182)

Protocols

https://www.protocols.io/view/share-seq-protocol-v2-2-di3y4gpw

Aliases

buenrostro-bernstein:scATAC Lib 455

Attribution

Jason Buenrostro, Broad

(

HG011986 — Jason Buenrostro

)

Sequencing Results (Illumina)

30 items

Read Names

IGVFFI1189SEBY

fastq

reads

8861

IGVFFI4002AIWH

Illumina NovaSeq X

22LMVNLT4

635 MB

Jason Buenrostro, Broad

validated

IGVFFI1268BJVJ

fastq

reads

4253

Barcode index

IGVFFI3760YALW

Illumina NovaSeq X

22523KLT3

774 MB

Jason Buenrostro, Broad

validated

IGVFFI2054LFNR

fastq

reads

8765

IGVFFI9432SBUB

Illumina NovaSeq X

22LMVNLT4

656 MB

Jason Buenrostro, Broad

validated

IGVFFI2451RIGT

fastq

reads

8861

IGVFFI4002AIWH

Illumina NovaSeq X

22LMVNLT4

664 MB

Jason Buenrostro, Broad

validated

IGVFFI2810UAUI

fastq

reads

9149

IGVFFI3310RMQA

Illumina NovaSeq X

22LMVNLT4

595 MB

Jason Buenrostro, Broad

validated

IGVFFI2849QDFE

fastq

reads

8957

IGVFFI3520PLMK

Illumina NovaSeq X

22LMVNLT4

632 MB

Jason Buenrostro, Broad

validated

IGVFFI2905SYNA

fastq

reads

8957

Barcode index

IGVFFI3520PLMK

Illumina NovaSeq X

22LMVNLT4

370 MB

Jason Buenrostro, Broad

validated

IGVFFI3614ICCF

fastq

reads

8477

IGVFFI2148FIED

Illumina NovaSeq X

22LMVNLT4

658 MB

Jason Buenrostro, Broad

validated

IGVFFI3695XERX

fastq

reads

9149

Barcode index

IGVFFI3310RMQA

Illumina NovaSeq X

22LMVNLT4

366 MB

Jason Buenrostro, Broad

validated

IGVFFI4263RYSG

fastq

reads

9053

IGVFFI6238VGRG

Illumina NovaSeq X

22LMVNLT4

625 MB

Jason Buenrostro, Broad

validated

Samples

1 item

Accession

Type

Sample Terms

Associated Construct Library Sets

Summary

IGVFSM2051NVYB

InVitroSystem

induced pluripotent stem cell

Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 182)