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IGVFDS7393LTPE

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens (male, 49 years) bone marrow cell (cellular sub pool: SS-PKR 7)
Protocols
Aliases
bradley-bernstein:scATAC Lib 40
buenrostro-bernstein:scATAC Lib 40
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

16 items
Read Names
fastq
reads
R1
2603
521 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1549
9.2 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1453
7.2 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1741
4.3 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2507
525 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2411
526 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1549
4.5 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1453
3.6 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2603
929 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2315
523 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
PrimaryCell
Homo sapiens (male, 49 years) bone marrow cell (cellular sub pool: SS-PKR 7)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1511
  • buenrostro-bernstein:Donor 1511
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 40
  • buenrostro-bernstein:scRNA Lib 40
Jason Buenrostro, Broad