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IGVFDS6307SCID

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 1), male, Homo sapiens (26 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 1
buenrostro-bernstein:scATAC Lib 1

Sequencing Results (Illumina)

16 items
fastq
reads
R1
2429
1.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2525
1.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2237
1.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1663
205 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1567
117 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1471
213 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2237
2.5 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1471
97 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1375
106 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1375
234 KB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 1), male, Homo sapiens (26 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1506
  • buenrostro-bernstein:Donor 1506
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 1
  • buenrostro-bernstein:scRNA Lib 1
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad