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IGVFDS5892YXLI

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 3), male, Homo sapiens (37 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 18
buenrostro-bernstein:scATAC Lib 18

Sequencing Results (Illumina)

16 items
fastq
reads
R2
1409
2.9 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1409
1.7 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1601
2.5 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2271
871 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1697
2.0 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2559
865 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1601
4.1 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2559
502 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2463
870 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1505
3.2 KB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 3), male, Homo sapiens (37 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1507
  • buenrostro-bernstein:Donor 1507
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 18
  • buenrostro-bernstein:scRNA Lib 18
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad