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IGVFDS5496ZDEU

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 5), male, Homo sapiens (29 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 29
buenrostro-bernstein:scATAC Lib 29

Sequencing Results (Illumina)

16 items
fastq
reads
R2
1527
3.8 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1431
2.2 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2389
433 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2581
428 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1527
2.3 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2293
432 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2485
430 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2485
251 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2581
249 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1623
3.2 KB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 5), male, Homo sapiens (29 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1510
  • buenrostro-bernstein:Donor 1510
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 29
  • buenrostro-bernstein:scRNA Lib 29
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad