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IGVFDS5353UEDG

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 182)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 458
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

30 items
Read Names
fastq
reads
I1
4248
Barcode index
22523KLT3
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8576
Read 2
22LMVNLT4
901 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9152
Read 2
22LMVNLT4
847 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8864
Barcode index
22LMVNLT4
549 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8576
Barcode index
22LMVNLT4
546 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8672
Barcode index
22LMVNLT4
553 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8864
Read 1
22LMVNLT4
947 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8768
Read 1
22LMVNLT4
935 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8768
Barcode index
22LMVNLT4
545 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8576
Read 1
22LMVNLT4
937 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 182)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 371
Jason Buenrostro, Broad