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IGVFDS5170AOJR

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 3), male, Homo sapiens (29 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 17
buenrostro-bernstein:scATAC Lib 17

Sequencing Results (Illumina)

16 items
fastq
reads
R2
2365
414 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2557
411 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2557
240 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1407
1.1 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1599
1.2 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2461
412 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1503
827 B
Jason Buenrostro, Broad
validated
fastq
reads
R1
2365
242 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1599
759 B
Jason Buenrostro, Broad
validated
fastq
reads
R1
2461
241 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 3), male, Homo sapiens (29 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1510
  • buenrostro-bernstein:Donor 1510
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 17
  • buenrostro-bernstein:scRNA Lib 17
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad