{
"@context": "/terms/",
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"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS5170AOJR",
"aliases": [
"bradley-bernstein:scATAC Lib 17",
"buenrostro-bernstein:scATAC Lib 17"
],
"assay_term": {
"@id": "/assay-terms/OBI_0002764/",
"status": "released",
"term_name": "single-cell ATAC-seq"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS5170AOJR](/measurement-sets/IGVFDS5170AOJR/) has sequence file(s): [IGVFFI8161UMIE](/sequence-files/IGVFFI8161UMIE/), [IGVFFI5959DRPA](/sequence-files/IGVFFI5959DRPA/), [IGVFFI8094ICUV](/sequence-files/IGVFFI8094ICUV/), [IGVFFI2797MOLN](/sequence-files/IGVFFI2797MOLN/), [IGVFFI0580ZRKN](/sequence-files/IGVFFI0580ZRKN/), [IGVFFI4636BLBK](/sequence-files/IGVFFI4636BLBK/), [IGVFFI6385MRIG](/sequence-files/IGVFFI6385MRIG/), [IGVFFI6655ELWK](/sequence-files/IGVFFI6655ELWK/), [IGVFFI6532TGMV](/sequence-files/IGVFFI6532TGMV/), [IGVFFI5603WQOS](/sequence-files/IGVFFI5603WQOS/), [IGVFFI4129ZEQR](/sequence-files/IGVFFI4129ZEQR/), [IGVFFI5127QPQX](/sequence-files/IGVFFI5127QPQX/), [IGVFFI5727XYRB](/sequence-files/IGVFFI5727XYRB/), [IGVFFI2709APKM](/sequence-files/IGVFFI2709APKM/), [IGVFFI1500LFKD](/sequence-files/IGVFFI1500LFKD/), [IGVFFI4561EZNG](/sequence-files/IGVFFI4561EZNG/) which do not have any `seqspecs`. Sequence files in a file set are expected to link to a sequence specification file.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS5170AOJR/"
},
{
"category": "mismatched status",
"detail": "Released primary cell [IGVFSM9424FQXS](/primary-cells/IGVFSM9424FQXS/) has in progress subobject source [jason-buenrostro](/sources/jason-buenrostro/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/primary-cells/IGVFSM9424FQXS/"
}
],
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{
"category": "missing barcode onlist",
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"level": 40,
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"name": "audit_onlist",
"path": "/measurement-sets/IGVFDS5170AOJR/"
}
]
},
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"title": "Jason Buenrostro"
},
"title": "A foundational resource of functional elements, TF footprints and gene regulatory interactions"
},
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"buenrostro-bernstein:BioSam 4567_SS-PKR 3"
],
"classifications": [
"primary cell"
],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0002371/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "bone marrow",
"term_name": "bone marrow"
}
],
"status": "released",
"summary": "bone marrow cell (cellular sub pool: SS-PKR 3), male, Homo sapiens (29 years)",
"taxa": "Homo sapiens"
}
],
"schema_version": "23",
"status": "released",
"submitted_by": {
"@id": "/users/c0838247-5022-46cf-a8fa-426e73bf4c94/",
"title": "Siddarth Wekhande"
},
"submitted_files_timestamp": "2024-02-12T21:41:34.640974+00:00",
"summary": "single-cell ATAC-seq (SHARE-seq)",
"uuid": "ba91c4b6-f7db-4c81-ba3b-a892da8e6809"
}