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IGVFDS5032LSER

released
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • Homo sapiens (male, 37 years) bone marrow cell (cellular sub pool: SS-PKR 4)
Protocols
Aliases
bradley-bernstein:scRNA Lib 24
buenrostro-bernstein:scRNA Lib 24
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

16 items
Read Names
fastq
reads
R1
1710
1.7 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1422
4.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1422
1.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2284
1.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1518
1.7 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2572
609 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1518
4.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1614
1.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1614
3.9 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2380
1.4 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
PrimaryCell
Homo sapiens (male, 37 years) bone marrow cell (cellular sub pool: SS-PKR 4)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1507
  • buenrostro-bernstein:Donor 1507
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 24
  • buenrostro-bernstein:scATAC Lib 24
Jason Buenrostro, Broad