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IGVFDS5016CFSP

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 4), male, Homo sapiens (49 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 22
buenrostro-bernstein:scATAC Lib 22

Sequencing Results (Illumina)

16 items
fastq
reads
R1
1417
978 B
Jason Buenrostro, Broad
validated
fastq
reads
R1
1705
791 B
Jason Buenrostro, Broad
validated
fastq
reads
R2
2375
734 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1609
908 B
Jason Buenrostro, Broad
validated
fastq
reads
R2
2279
730 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1705
1.3 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2567
725 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2567
423 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2279
427 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1513
782 B
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 4), male, Homo sapiens (49 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1511
  • buenrostro-bernstein:Donor 1511
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 22
  • buenrostro-bernstein:scRNA Lib 22
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad