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IGVFDS4642GQLX

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 199)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 547
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

30 items
Read Names
fastq
reads
I1
4304
Barcode index
H75F7DSX5
2.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8693
Barcode index
22LMVNLT4
511 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9077
Barcode index
22LMVNLT4
498 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4304
Read 2
H75F7DSX5
2.5 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4304
Read 1
H75F7DSX5
5.5 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8597
Read 1
22LMVNLT4
859 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4258
Barcode index
22523KLT3
985 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8693
Read 2
22LMVNLT4
843 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8981
Barcode index
22LMVNLT4
483 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8501
Read 1
22LMVNLT4
895 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 199)

Donors

99 items
Aliases
  • buenrostro-bernstein:Donor 1943
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1909
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1937
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1907
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1963
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1952
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1946
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1982
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1975
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 374
Jason Buenrostro, Broad