{
"@context": "/terms/",
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"Item"
],
"accession": "IGVFDS4642GQLX",
"aliases": [
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],
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],
"status": "released",
"term_name": "single-cell ATAC-seq"
},
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{
"category": "missing publication",
"detail": "In vitro system [IGVFSM0636UWGR](/in-vitro-systems/IGVFSM0636UWGR/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/in-vitro-systems/IGVFSM0636UWGR/"
},
{
"category": "missing publication",
"detail": "Measurement set [IGVFDS4642GQLX](/measurement-sets/IGVFDS4642GQLX/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_file_set_missing_publication",
"path": "/measurement-sets/IGVFDS4642GQLX/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS4642GQLX](/measurement-sets/IGVFDS4642GQLX/) has in progress subobject tabular file [IGVFFI0400MBIM](/tabular-files/IGVFFI0400MBIM/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS4642GQLX/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS4642GQLX](/measurement-sets/IGVFDS4642GQLX/) has in progress subobject tabular file [IGVFFI1310BRDS](/tabular-files/IGVFFI1310BRDS/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS4642GQLX/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS4642GQLX](/measurement-sets/IGVFDS4642GQLX/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS4642GQLX/"
}
]
},
"award": {
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"component": "mapping",
"contact_pi": {
"@id": "/users/33c6eb70-e143-4f77-9661-4b3905737daa/",
"title": "Jason Buenrostro"
},
"title": "A foundational resource of functional elements, TF footprints and gene regulatory interactions"
},
"control_for": [],
"controlled_access": true,
"creation_timestamp": "2024-08-20T15:01:04.773797+00:00",
"data_use_limitation_summaries": [
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],
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{
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{
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},
{
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},
{
"@id": "/human-donors/IGVFDO3633ISAY/",
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},
{
"@id": "/human-donors/IGVFDO4092SMML/",
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},
{
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},
{
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},
{
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"taxa": "Homo sapiens"
},
{
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},
{
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},
{
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"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
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},
{
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},
{
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8459PAOB/",
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"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4747GRSS/",
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"sex": "unspecified",
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},
{
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},
{
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"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3006ZNMC/",
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"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0980QZSD/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2893BVNI/",
"accession": "IGVFDO2893BVNI",
"aliases": [
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"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2217VSIY/",
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"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9164SEDG/",
"accession": "IGVFDO9164SEDG",
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"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4923LWHA/",
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{
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},
{
"@id": "/human-donors/IGVFDO7018SAYO/",
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"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5669IKNL/",
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"taxa": "Homo sapiens"
},
{
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{
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},
{
"@id": "/human-donors/IGVFDO3115AJIV/",
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"taxa": "Homo sapiens"
},
{
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8042WODZ/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5869XCBR/",
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],
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0211CZWE/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9115TZAP/",
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},
{
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},
{
"@id": "/human-donors/IGVFDO1255IJEH/",
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},
{
"@id": "/human-donors/IGVFDO9770WYQG/",
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},
{
"@id": "/human-donors/IGVFDO1417AZJE/",
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{
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{
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},
{
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},
{
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"taxa": "Homo sapiens"
},
{
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},
{
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{
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},
{
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},
{
"@id": "/human-donors/IGVFDO2588YUMG/",
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"sex": "unspecified",
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},
{
"@id": "/human-donors/IGVFDO2811ZFFP/",
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},
{
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},
{
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"taxa": "Homo sapiens"
},
{
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4761JIBM/",
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"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5859XGBW/",
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},
{
"@id": "/human-donors/IGVFDO2605TXDO/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4283QEWA/",
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},
{
"@id": "/human-donors/IGVFDO2540COFN/",
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"taxa": "Homo sapiens"
},
{
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"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6075RUJJ/",
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"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3385RWXZ/",
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"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5920NCRK/",
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},
{
"@id": "/human-donors/IGVFDO3560WDAC/",
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},
{
"@id": "/human-donors/IGVFDO8004EZUP/",
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"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1467HGMO/",
"accession": "IGVFDO1467HGMO",
"aliases": [
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5150ROJL/",
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],
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"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3010FULG/",
"accession": "IGVFDO3010FULG",
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],
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"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9815AMKV/",
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0279GJBF/",
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],
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"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6183QMMP/",
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"aliases": [
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"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
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