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IGVFDS4637BCMX

released
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 8), male, Homo sapiens (37 years)
Protocols
Aliases
bradley-bernstein:scRNA Lib 48
buenrostro-bernstein:scRNA Lib 48

Sequencing Results (Illumina)

16 items
fastq
reads
R1
2620
849 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2332
1.9 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2332
867 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2428
1.9 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2620
1.8 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2524
1.9 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1470
1.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1758
1.7 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2428
869 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1662
3.9 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 8), male, Homo sapiens (37 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1507
  • buenrostro-bernstein:Donor 1507
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 48
  • buenrostro-bernstein:scATAC Lib 48
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad