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IGVFDS4420JSXO

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 6), male, Homo sapiens (29 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 35
buenrostro-bernstein:scATAC Lib 35

Sequencing Results (Illumina)

16 items
fastq
reads
R1
1443
25 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1635
24 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2305
234 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1539
57 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2305
401 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2497
399 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1635
50 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1539
27 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1731
25 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2593
399 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 6), male, Homo sapiens (29 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1510
  • buenrostro-bernstein:Donor 1510
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 35
  • buenrostro-bernstein:scRNA Lib 35
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad