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IGVFDS3961PPIP

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (29 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 39
buenrostro-bernstein:scATAC Lib 39

Sequencing Results (Illumina)

16 items
fastq
reads
R1
2409
447 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1451
6.0 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2505
446 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1643
5.6 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1547
11 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1739
11 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1451
12 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2601
790 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2409
796 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1547
5.6 KB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (29 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1509
  • buenrostro-bernstein:Donor 1509
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 39
  • buenrostro-bernstein:scRNA Lib 39
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad