IGVFDS3957EPTF

released

GRU

File Set Type

experimental data

Summary

single-cell ATAC-seq (SHARE-seq)

Assay Term

single-cell ATAC-seq

Sample Summaries

Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 208)

Protocols

https://www.protocols.io/view/share-seq-protocol-v2-2-di3y4gpw

Aliases

buenrostro-bernstein:scATAC Lib 604

Attribution

Jason Buenrostro, Broad

(

HG011986 — Jason Buenrostro

)

Sequencing Results (Illumina)

36 items

Read Names

IGVFFI0351GVJR

fastq

reads

8714

IGVFFI9927CJBA

Illumina NovaSeq X

22LMVNLT4

401 MB

Jason Buenrostro, Broad

validated

IGVFFI0666GGPQ

fastq

reads

8714

IGVFFI9927CJBA

Illumina NovaSeq X

22LMVNLT4

392 MB

Jason Buenrostro, Broad

validated

IGVFFI1169NJTQ

fastq

reads

8618

IGVFFI0932JBWX

Illumina NovaSeq X

22LMVNLT4

397 MB

Jason Buenrostro, Broad

validated

IGVFFI1349UIYP

fastq

reads

9194

Barcode index

IGVFFI8832EVMR

Illumina NovaSeq X

22LMVNLT4

222 MB

Jason Buenrostro, Broad

validated

IGVFFI1579QVAP

fastq

reads

3916

IGVFFI1496XDIS

Illumina NovaSeq X

22523KLT3

223 MB

Jason Buenrostro, Broad

validated

IGVFFI2783UVSX

fastq

reads

8906

IGVFFI2367QBBK

Illumina NovaSeq X

22LMVNLT4

388 MB

Jason Buenrostro, Broad

validated

IGVFFI3448BNIK

fastq

reads

3916

Barcode index

IGVFFI1496XDIS

Illumina NovaSeq X

22523KLT3

193 MB

Jason Buenrostro, Broad

validated

IGVFFI3686TWSZ

fastq

reads

9098

IGVFFI3994RGHU

Illumina NovaSeq X

22LMVNLT4

395 MB

Jason Buenrostro, Broad

validated

IGVFFI3705MCOF

fastq

reads

9098

IGVFFI3994RGHU

Illumina NovaSeq X

22LMVNLT4

380 MB

Jason Buenrostro, Broad

validated

IGVFFI3815CPUH

fastq

reads

8810

Barcode index

IGVFFI9181SPZX

Illumina NovaSeq X

22LMVNLT4

234 MB

Jason Buenrostro, Broad

validated

Samples

1 item

Accession

Type

Sample Terms

Associated Construct Library Sets

Summary

IGVFSM2495KWSE

InVitroSystem

induced pluripotent stem cell

Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 208)