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IGVFDS3597FNVD

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 2), male, Homo sapiens (29 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 9
buenrostro-bernstein:scATAC Lib 9

Sequencing Results (Illumina)

16 items
fastq
reads
R2
2445
564 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2541
561 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1583
6.4 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2541
327 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1679
7.5 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1583
11 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1487
7.6 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2253
329 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2445
330 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2349
567 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 2), male, Homo sapiens (29 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1509
  • buenrostro-bernstein:Donor 1509
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 9
  • buenrostro-bernstein:scRNA Lib 9
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad