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IGVFDS3373WDMA

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 180)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 447
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

33 items
Read Names
fastq
reads
R2
8475
Read 2
22LMVNLT4
729 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8763
Read 1
22LMVNLT4
719 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4036
Read 1
22523KLT3
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8571
Barcode index
22LMVNLT4
420 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9051
Barcode index
22LMVNLT4
419 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8763
Read 2
22LMVNLT4
697 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8475
Barcode index
22LMVNLT4
437 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9147
Read 2
22LMVNLT4
660 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8763
Barcode index
22LMVNLT4
418 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8667
Read 2
22LMVNLT4
711 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 180)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 366
Jason Buenrostro, Broad