IGVFDS3373WDMA

1{
2    "@context": "/terms/",
3    "@id": "/measurement-sets/IGVFDS3373WDMA/",
4    "@type": [
5        "MeasurementSet",
6        "FileSet",
7        "Item"
8    ],
9    "accession": "IGVFDS3373WDMA",
10    "aliases": [
11        "buenrostro-bernstein:scATAC Lib 447"
12    ],
13    "assay_term": {
14        "@id": "/assay-terms/OBI_0002764/",
15        "assay_slims": [
16            "chromatin accessibility"
17        ],
18        "status": "released",
19        "term_name": "single-cell ATAC-seq"
20    },
21    "audit": {
22        "INTERNAL_ACTION": [
23            {
24                "category": "missing publication",
25                "detail": "In vitro system [IGVFSM6804CCZD](/in-vitro-systems/IGVFSM6804CCZD/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
26                "level": 30,
27                "level_name": "INTERNAL_ACTION",
28                "name": "audit_sample_missing_publication",
29                "path": "/in-vitro-systems/IGVFSM6804CCZD/"
30            },
31            {
32                "category": "missing publication",
33                "detail": "Measurement set [IGVFDS3373WDMA](/measurement-sets/IGVFDS3373WDMA/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
34                "level": 30,
35                "level_name": "INTERNAL_ACTION",
36                "name": "audit_file_set_missing_publication",
37                "path": "/measurement-sets/IGVFDS3373WDMA/"
38            },
39            {
40                "category": "mismatched status",
41                "detail": "Released measurement set [IGVFDS3373WDMA](/measurement-sets/IGVFDS3373WDMA/) has in progress subobject tabular file [IGVFFI0400MBIM](/tabular-files/IGVFFI0400MBIM/).",
42                "level": 30,
43                "level_name": "INTERNAL_ACTION",
44                "name": "audit_item_status",
45                "path": "/measurement-sets/IGVFDS3373WDMA/"
46            },
47            {
48                "category": "mismatched status",
49                "detail": "Released measurement set [IGVFDS3373WDMA](/measurement-sets/IGVFDS3373WDMA/) has in progress subobject tabular file [IGVFFI1312HTQX](/tabular-files/IGVFFI1312HTQX/).",
50                "level": 30,
51                "level_name": "INTERNAL_ACTION",
52                "name": "audit_item_status",
53                "path": "/measurement-sets/IGVFDS3373WDMA/"
54            }
55        ],
56        "NOT_COMPLIANT": [
57            {
58                "category": "missing strand specificity",
59                "detail": "Measurement set [IGVFDS3373WDMA](/measurement-sets/IGVFDS3373WDMA/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
60                "level": 50,
61                "level_name": "NOT_COMPLIANT",
62                "name": "audit_missing_strand_specificity",
63                "path": "/measurement-sets/IGVFDS3373WDMA/"
64            }
65        ]
66    },
67    "award": {
68        "@id": "/awards/HG011986/",
69        "component": "mapping",
70        "contact_pi": {
71            "@id": "/users/33c6eb70-e143-4f77-9661-4b3905737daa/",
72            "title": "Jason Buenrostro"
73        },
74        "title": "A foundational resource of functional elements, TF footprints and gene regulatory interactions"
75    },
76    "control_for": [],
77    "controlled_access": true,
78    "creation_timestamp": "2024-08-20T15:00:26.085586+00:00",
79    "data_use_limitation_summaries": [
80        "GRU"
81    ],
82    "donors": [
83        {
84            "@id": "/human-donors/IGVFDO6890GKJS/",
85            "accession": "IGVFDO6890GKJS",
86            "aliases": [
87                "buenrostro-bernstein:Donor 1836"
88            ],
89            "sex": "unspecified",
90            "status": "released",
91            "taxa": "Homo sapiens"
92        },
93        {
94            "@id": "/human-donors/IGVFDO8772PWON/",
95            "accession": "IGVFDO8772PWON",
96            "aliases": [
97                "buenrostro-bernstein:Donor 1873"
98            ],
99            "sex": "unspecified",
100            "status": "released",
101            "taxa": "Homo sapiens"
102        },
103        {
104            "@id": "/human-donors/IGVFDO7956CWXZ/",
105            "accession": "IGVFDO7956CWXZ",
106            "aliases": [
107                "buenrostro-bernstein:Donor 1821"
108            ],
109            "sex": "unspecified",
110            "status": "released",
111            "taxa": "Homo sapiens"
112        },
113        {
114            "@id": "/human-donors/IGVFDO0597VIVH/",
115            "accession": "IGVFDO0597VIVH",
116            "aliases": [
117                "buenrostro-bernstein:Donor 1874"
118            ],
119            "sex": "unspecified",
120            "status": "released",
121            "taxa": "Homo sapiens"
122        },
123        {
124            "@id": "/human-donors/IGVFDO1502TPVD/",
125            "accession": "IGVFDO1502TPVD",
126            "aliases": [
127                "buenrostro-bernstein:Donor 1849"
128            ],
129            "sex": "unspecified",
130            "status": "released",
131            "taxa": "Homo sapiens"
132        },
133        {
134            "@id": "/human-donors/IGVFDO2343ZVKW/",
135            "accession": "IGVFDO2343ZVKW",
136            "aliases": [
137                "buenrostro-bernstein:Donor 1869"
138            ],
139            "sex": "unspecified",
140            "status": "released",
141            "taxa": "Homo sapiens"
142        },
143        {
144            "@id": "/human-donors/IGVFDO5748WCDL/",
145            "accession": "IGVFDO5748WCDL",
146            "aliases": [
147                "buenrostro-bernstein:Donor 1889"
148            ],
149            "sex": "unspecified",
150            "status": "released",
151            "taxa": "Homo sapiens"
152        },
153        {
154            "@id": "/human-donors/IGVFDO6673DKZI/",
155            "accession": "IGVFDO6673DKZI",
156            "aliases": [
157                "buenrostro-bernstein:Donor 1880"
158            ],
159            "sex": "unspecified",
160            "status": "released",
161            "taxa": "Homo sapiens"
162        },
163        {
164            "@id": "/human-donors/IGVFDO6720KIII/",
165            "accession": "IGVFDO6720KIII",
166            "aliases": [
167                "buenrostro-bernstein:Donor 1868"
168            ],
169            "sex": "unspecified",
170            "status": "released",
171            "taxa": "Homo sapiens"
172        },
173        {
174            "@id": "/human-donors/IGVFDO6180JBWH/",
175            "accession": "IGVFDO6180JBWH",
176            "aliases": [
177                "buenrostro-bernstein:Donor 1855"
178            ],
179            "sex": "unspecified",
180            "status": "released",
181            "taxa": "Homo sapiens"
182        },
183        {
184            "@id": "/human-donors/IGVFDO2028ZXZQ/",
185            "accession": "IGVFDO2028ZXZQ",
186            "aliases": [
187                "buenrostro-bernstein:Donor 1820"
188            ],
189            "sex": "unspecified",
190            "status": "released",
191            "taxa": "Homo sapiens"
192        },
193        {
194            "@id": "/human-donors/IGVFDO2015BBZM/",
195            "accession": "IGVFDO2015BBZM",
196            "aliases": [
197                "buenrostro-bernstein:Donor 1813"
198            ],
199            "sex": "unspecified",
200            "status": "released",
201            "taxa": "Homo sapiens"
202        },
203        {
204            "@id": "/human-donors/IGVFDO2796VIEN/",
205            "accession": "IGVFDO2796VIEN",
206            "aliases": [
207                "buenrostro-bernstein:Donor 1884"
208            ],
209            "sex": "unspecified",
210            "status": "released",
211            "taxa": "Homo sapiens"
212        },
213        {
214            "@id": "/human-donors/IGVFDO2453FLSI/",
215            "accession": "IGVFDO2453FLSI",
216            "aliases": [
217                "buenrostro-bernstein:Donor 1832"
218            ],
219            "sex": "unspecified",
220            "status": "released",
221            "taxa": "Homo sapiens"
222        },
223        {
224            "@id": "/human-donors/IGVFDO6969ZGNB/",
225            "accession": "IGVFDO6969ZGNB",
226            "aliases": [
227                "buenrostro-bernstein:Donor 1844"
228            ],
229            "sex": "unspecified",
230            "status": "released",
231            "taxa": "Homo sapiens"
232        },
233        {
234            "@id": "/human-donors/IGVFDO0452ROLO/",
235            "accession": "IGVFDO0452ROLO",
236            "aliases": [
237                "buenrostro-bernstein:Donor 1867"
238            ],
239            "sex": "unspecified",
240            "status": "released",
241            "taxa": "Homo sapiens"
242        },
243        {
244            "@id": "/human-donors/IGVFDO9942ECYN/",
245            "accession": "IGVFDO9942ECYN",
246            "aliases": [
247                "buenrostro-bernstein:Donor 1742"
248            ],
249            "sex": "unspecified",
250            "status": "released",
251            "taxa": "Homo sapiens"
252        },
253        {
254            "@id": "/human-donors/IGVFDO8776OLQD/",
255            "accession": "IGVFDO8776OLQD",
256            "aliases": [
257                "buenrostro-bernstein:Donor 1744"
258            ],
259            "sex": "unspecified",
260            "status": "released",
261            "taxa": "Homo sapiens"
262        },
263        {
264            "@id": "/human-donors/IGVFDO7983CLUG/",
265            "accession": "IGVFDO7983CLUG",
266            "aliases": [
267                "buenrostro-bernstein:Donor 1852"
268            ],
269            "sex": "unspecified",
270            "status": "released",
271            "taxa": "Homo sapiens"
272        },
273        {
274            "@id": "/human-donors/IGVFDO0273LMQQ/",
275            "accession": "IGVFDO0273LMQQ",
276            "aliases": [
277                "buenrostro-bernstein:Donor 1876"
278            ],
279            "sex": "unspecified",
280            "status": "released",
281            "taxa": "Homo sapiens"
282        },
283        {
284            "@id": "/human-donors/IGVFDO6328ESSA/",
285            "accession": "IGVFDO6328ESSA",
286            "aliases": [
287                "buenrostro-bernstein:Donor 1768"
288            ],
289            "sex": "unspecified",
290            "status": "released",
291            "taxa": "Homo sapiens"
292        },
293        {
294            "@id": "/human-donors/IGVFDO0392YIJG/",
295            "accession": "IGVFDO0392YIJG",
296            "aliases": [
297                "buenrostro-bernstein:Donor 1892"
298            ],
299            "sex": "unspecified",
300            "status": "released",
301            "taxa": "Homo sapiens"
302        },
303        {
304            "@id": "/human-donors/IGVFDO0527HIIJ/",
305            "accession": "IGVFDO0527HIIJ",
306            "aliases": [
307                "buenrostro-bernstein:Donor 1838"
308            ],
309            "sex": "unspecified",
310            "status": "released",
311            "taxa": "Homo sapiens"
312        },
313        {
314            "@id": "/human-donors/IGVFDO4620JPIG/",
315            "accession": "IGVFDO4620JPIG",
316            "aliases": [
317                "buenrostro-bernstein:Donor 1822"
318            ],
319            "sex": "unspecified",
320            "status": "released",
321            "taxa": "Homo sapiens"
322        },
323        {
324            "@id": "/human-donors/IGVFDO1535CIEE/",
325            "accession": "IGVFDO1535CIEE",
326            "aliases": [
327                "buenrostro-bernstein:Donor 1793"
328            ],
329            "sex": "unspecified",
330            "status": "released",
331            "taxa": "Homo sapiens"
332        },
333        {
334            "@id": "/human-donors/IGVFDO4451SLQW/",
335            "accession": "IGVFDO4451SLQW",
336            "aliases": [
337                "buenrostro-bernstein:Donor 1789"
338            ],
339            "sex": "unspecified",
340            "status": "released",
341            "taxa": "Homo sapiens"
342        },
343        {
344            "@id": "/human-donors/IGVFDO6694QTLS/",
345            "accession": "IGVFDO6694QTLS",
346            "aliases": [
347                "buenrostro-bernstein:Donor 1826"
348            ],
349            "sex": "unspecified",
350            "status": "released",
351            "taxa": "Homo sapiens"
352        },
353        {
354            "@id": "/human-donors/IGVFDO0143YSWQ/",
355            "accession": "IGVFDO0143YSWQ",
356            "aliases": [
357                "buenrostro-bernstein:Donor 1860"
358            ],
359            "sex": "unspecified",
360            "status": "released",
361            "taxa": "Homo sapiens"
362        },
363        {
364            "@id": "/human-donors/IGVFDO5257YVJL/",
365            "accession": "IGVFDO5257YVJL",
366            "aliases": [
367                "buenrostro-bernstein:Donor 1825"
368            ],
369            "sex": "unspecified",
370            "status": "released",
371            "taxa": "Homo sapiens"
372        },
373        {
374            "@id": "/human-donors/IGVFDO9594EWNE/",
375            "accession": "IGVFDO9594EWNE",
376            "aliases": [
377                "buenrostro-bernstein:Donor 1878"
378            ],
379            "sex": "unspecified",
380            "status": "released",
381            "taxa": "Homo sapiens"
382        },
383        {
384            "@id": "/human-donors/IGVFDO8727EFXZ/",
385            "accession": "IGVFDO8727EFXZ",
386            "aliases": [
387                "buenrostro-bernstein:Donor 1831"
388            ],
389            "sex": "unspecified",
390            "status": "released",
391            "taxa": "Homo sapiens"
392        },
393        {
394            "@id": "/human-donors/IGVFDO7817ENDD/",
395            "accession": "IGVFDO7817ENDD",
396            "aliases": [
397                "buenrostro-bernstein:Donor 1877"
398            ],
399            "sex": "unspecified",
400            "status": "released",
401            "taxa": "Homo sapiens"
402        },
403        {
404            "@id": "/human-donors/IGVFDO4222QOSB/",
405            "accession": "IGVFDO4222QOSB",
406            "aliases": [
407                "buenrostro-bernstein:Donor 1827"
408            ],
409            "sex": "unspecified",
410            "status": "released",
411            "taxa": "Homo sapiens"
412        },
413        {
414            "@id": "/human-donors/IGVFDO6316KUFG/",
415            "accession": "IGVFDO6316KUFG",
416            "aliases": [
417                "buenrostro-bernstein:Donor 1871"
418            ],
419            "sex": "unspecified",
420            "status": "released",
421            "taxa": "Homo sapiens"
422        },
423        {
424            "@id": "/human-donors/IGVFDO6675DJLJ/",
425            "accession": "IGVFDO6675DJLJ",
426            "aliases": [
427                "buenrostro-bernstein:Donor 1837"
428            ],
429            "sex": "unspecified",
430            "status": "released",
431            "taxa": "Homo sapiens"
432        },
433        {
434            "@id": "/human-donors/IGVFDO0916PWWE/",
435            "accession": "IGVFDO0916PWWE",
436            "aliases": [
437                "buenrostro-bernstein:Donor 1845"
438            ],
439            "sex": "unspecified",
440            "status": "released",
441            "taxa": "Homo sapiens"
442        },
443        {
444            "@id": "/human-donors/IGVFDO7440MWLG/",
445            "accession": "IGVFDO7440MWLG",
446            "aliases": [
447                "buenrostro-bernstein:Donor 1846"
448            ],
449            "sex": "unspecified",
450            "status": "released",
451            "taxa": "Homo sapiens"
452        },
453        {
454            "@id": "/human-donors/IGVFDO1906JPPE/",
455            "accession": "IGVFDO1906JPPE",
456            "aliases": [
457                "buenrostro-bernstein:Donor 1893"
458            ],
459            "sex": "unspecified",
460            "status": "released",
461            "taxa": "Homo sapiens"
462        },
463        {
464            "@id": "/human-donors/IGVFDO3364ORGK/",
465            "accession": "IGVFDO3364ORGK",
466            "aliases": [
467                "buenrostro-bernstein:Donor 1897"
468            ],
469            "sex": "unspecified",
470            "status": "released",
471            "taxa": "Homo sapiens"
472        },
473        {
474            "@id": "/human-donors/IGVFDO7567RWAK/",
475            "accession": "IGVFDO7567RWAK",
476            "aliases": [
477                "buenrostro-bernstein:Donor 1857"
478            ],
479            "sex": "unspecified",
480            "status": "released",
481            "taxa": "Homo sapiens"
482        },
483        {
484            "@id": "/human-donors/IGVFDO7476FWEA/",
485            "accession": "IGVFDO7476FWEA",
486            "aliases": [
487                "buenrostro-bernstein:Donor 1851"
488            ],
489            "sex": "unspecified",
490            "status": "released",
491            "taxa": "Homo sapiens"
492        },
493        {
494            "@id": "/human-donors/IGVFDO0233FJJF/",
495            "accession": "IGVFDO0233FJJF",
496            "aliases": [
497                "buenrostro-bernstein:Donor 1834"
498            ],
499            "sex": "unspecified",
500            "status": "released",
501            "taxa": "Homo sapiens"
502        },
503        {
504            "@id": "/human-donors/IGVFDO3184WKWK/",
505            "accession": "IGVFDO3184WKWK",
506            "aliases": [
507                "buenrostro-bernstein:Donor 1861"
508            ],
509            "sex": "unspecified",
510            "status": "released",
511            "taxa": "Homo sapiens"
512        },
513        {
514            "@id": "/human-donors/IGVFDO3937NOVL/",
515            "accession": "IGVFDO3937NOVL",
516            "aliases": [
517                "buenrostro-bernstein:Donor 1858"
518            ],
519            "sex": "unspecified",
520            "status": "released",
521            "taxa": "Homo sapiens"
522        },
523        {
524            "@id": "/human-donors/IGVFDO0995XOJH/",
525            "accession": "IGVFDO0995XOJH",
526            "aliases": [
527                "buenrostro-bernstein:Donor 1872"
528            ],
529            "sex": "unspecified",
530            "status": "released",
531            "taxa": "Homo sapiens"
532        },
533        {
534            "@id": "/human-donors/IGVFDO2142TSPQ/",
535            "accession": "IGVFDO2142TSPQ",
536            "aliases": [
537                "buenrostro-bernstein:Donor 1881"
538            ],
539            "sex": "unspecified",
540            "status": "released",
541            "taxa": "Homo sapiens"
542        },
543        {
544            "@id": "/human-donors/IGVFDO9402EPTG/",
545            "accession": "IGVFDO9402EPTG",
546            "aliases": [
547                "buenrostro-bernstein:Donor 1829"
548            ],
549            "sex": "unspecified",
550            "status": "released",
551            "taxa": "Homo sapiens"
552        },
553        {
554            "@id": "/human-donors/IGVFDO7542OMCX/",
555            "accession": "IGVFDO7542OMCX",
556            "aliases": [
557                "buenrostro-bernstein:Donor 1819"
558            ],
559            "sex": "unspecified",
560            "status": "released",
561            "taxa": "Homo sapiens"
562        },
563        {
564            "@id": "/human-donors/IGVFDO1215CYXN/",
565            "accession": "IGVFDO1215CYXN",
566            "aliases": [
567                "buenrostro-bernstein:Donor 1843"
568            ],
569            "sex": "unspecified",
570            "status": "released",
571            "taxa": "Homo sapiens"
572        },
573        {
574            "@id": "/human-donors/IGVFDO2131TKFT/",
575            "accession": "IGVFDO2131TKFT",
576            "aliases": [
577                "buenrostro-bernstein:Donor 1811"
578            ],
579            "sex": "unspecified",
580            "status": "released",
581            "taxa": "Homo sapiens"
582        },
583        {
584            "@id": "/human-donors/IGVFDO0875HNRV/",
585            "accession": "IGVFDO0875HNRV",
586            "aliases": [
587                "buenrostro-bernstein:Donor 1895"
588            ],
589            "sex": "unspecified",
590            "status": "released",
591            "taxa": "Homo sapiens"
592        },
593        {
594            "@id": "/human-donors/IGVFDO0455AULY/",
595            "accession": "IGVFDO0455AULY",
596            "aliases": [
597                "buenrostro-bernstein:Donor 1814"
598            ],
599            "sex": "unspecified",
600            "status": "released",
601            "taxa": "Homo sapiens"
602        },
603        {
604            "@id": "/human-donors/IGVFDO6626TJEC/",
605            "accession": "IGVFDO6626TJEC",
606            "aliases": [
607                "buenrostro-bernstein:Donor 1888"
608            ],
609            "sex": "unspecified",
610            "status": "released",
611            "taxa": "Homo sapiens"
612        },
613        {
614            "@id": "/human-donors/IGVFDO3469EFJR/",
615            "accession": "IGVFDO3469EFJR",
616            "aliases": [
617                "buenrostro-bernstein:Donor 1741"
618            ],
619            "sex": "unspecified",
620            "status": "released",
621            "taxa": "Homo sapiens"
622        },
623        {
624            "@id": "/human-donors/IGVFDO9707NUOC/",
625            "accession": "IGVFDO9707NUOC",
626            "aliases": [
627                "buenrostro-bernstein:Donor 1859"
628            ],
629            "sex": "unspecified",
630            "status": "released",
631            "taxa": "Homo sapiens"
632        },
633        {
634            "@id": "/human-donors/IGVFDO0674VHCY/",
635            "accession": "IGVFDO0674VHCY",
636            "aliases": [
637                "buenrostro-bernstein:Donor 1896"
638            ],
639            "sex": "unspecified",
640            "status": "released",
641            "taxa": "Homo sapiens"
642        },
643        {
644            "@id": "/human-donors/IGVFDO8979DYIF/",
645            "accession": "IGVFDO8979DYIF",
646            "aliases": [
647                "buenrostro-bernstein:Donor 1743"
648            ],
649            "sex": "unspecified",
650            "status": "released",
651            "taxa": "Homo sapiens"
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1900            "creation_timestamp": "2025-03-28T18:40:26.808721+00:00",
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1904            "s3_uri": "s3://igvf-files/2025/03/28/bb625c17-70af-4f82-87c9-8a024c416978/IGVFFI8153HRXW.yaml.gz",
1905            "status": "released",
1906            "submitted_file_name": "gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI9353ARLK_seqspec.yaml.gz",
1907            "upload_status": "validated"
1908        },
1909        {
1910            "@id": "/configuration-files/IGVFFI3091TFSD/",
1911            "accession": "IGVFFI3091TFSD",
1912            "aliases": [
1913                "buenrostro-bernstein:SS-LS_9051_seqspec"
1914            ],
1915            "content_type": "seqspec",
1916            "creation_timestamp": "2025-03-28T19:52:15.820553+00:00",
1917            "file_format": "yaml",
1918            "file_size": 1332,
1919            "href": "/configuration-files/IGVFFI3091TFSD/@@download/IGVFFI3091TFSD.yaml.gz",
1920            "s3_uri": "s3://igvf-files/2025/03/28/9b8f47a0-5a80-452f-bbdf-f0ec197a7fe0/IGVFFI3091TFSD.yaml.gz",
1921            "status": "released",
1922            "submitted_file_name": "gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI7727QHIC_seqspec.yaml.gz",
1923            "upload_status": "validated"
1924        },
1925        {
1926            "@id": "/configuration-files/IGVFFI0464LPCH/",
1927            "accession": "IGVFFI0464LPCH",
1928            "aliases": [
1929                "buenrostro-bernstein:SS-LS_8763_seqspec"
1930            ],
1931            "content_type": "seqspec",
1932            "creation_timestamp": "2025-03-28T18:53:10.252513+00:00",
1933            "file_format": "yaml",
1934            "file_size": 1334,
1935            "href": "/configuration-files/IGVFFI0464LPCH/@@download/IGVFFI0464LPCH.yaml.gz",
1936            "s3_uri": "s3://igvf-files/2025/03/28/10681491-6c9f-4f12-afc4-2b12bd45b575/IGVFFI0464LPCH.yaml.gz",
1937            "status": "released",
1938            "submitted_file_name": "gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI0817ZXWT_seqspec.yaml.gz",
1939            "upload_status": "validated"
1940        },
1941        {
1942            "@id": "/configuration-files/IGVFFI6370OQOG/",
1943            "accession": "IGVFFI6370OQOG",
1944            "aliases": [
1945                "buenrostro-bernstein:SS-LS_8955_seqspec"
1946            ],
1947            "content_type": "seqspec",
1948            "creation_timestamp": "2025-03-28T19:36:22.299648+00:00",
1949            "file_format": "yaml",
1950            "file_size": 1332,
1951            "href": "/configuration-files/IGVFFI6370OQOG/@@download/IGVFFI6370OQOG.yaml.gz",
1952            "s3_uri": "s3://igvf-files/2025/03/28/64ba660d-9dce-42c4-826d-b29a641d5a27/IGVFFI6370OQOG.yaml.gz",
1953            "status": "released",
1954            "submitted_file_name": "gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI7558SBBG_seqspec.yaml.gz",
1955            "upload_status": "validated"
1956        },
1957        {
1958            "@id": "/configuration-files/IGVFFI3638ANGM/",
1959            "accession": "IGVFFI3638ANGM",
1960            "aliases": [
1961                "buenrostro-bernstein:SS-LS_9147_seqspec"
1962            ],
1963            "content_type": "seqspec",
1964            "creation_timestamp": "2025-03-28T20:09:55.809632+00:00",
1965            "file_format": "yaml",
1966            "file_size": 1330,
1967            "href": "/configuration-files/IGVFFI3638ANGM/@@download/IGVFFI3638ANGM.yaml.gz",
1968            "s3_uri": "s3://igvf-files/2025/03/28/f1ac5d9f-08d5-464d-a9fd-37202402977d/IGVFFI3638ANGM.yaml.gz",
1969            "status": "released",
1970            "submitted_file_name": "gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI6090PJAT_seqspec.yaml.gz",
1971            "upload_status": "validated"
1972        },
1973        {
1974            "@id": "/configuration-files/IGVFFI5384KDAH/",
1975            "accession": "IGVFFI5384KDAH",
1976            "aliases": [
1977                "buenrostro-bernstein:SS-LS_8859_seqspec"
1978            ],
1979            "content_type": "seqspec",
1980            "creation_timestamp": "2025-03-28T19:18:22.239655+00:00",
1981            "file_format": "yaml",
1982            "file_size": 1331,
1983            "href": "/configuration-files/IGVFFI5384KDAH/@@download/IGVFFI5384KDAH.yaml.gz",
1984            "s3_uri": "s3://igvf-files/2025/03/28/1da55a87-3c34-46d7-a811-67816213f77e/IGVFFI5384KDAH.yaml.gz",
1985            "status": "released",
1986            "submitted_file_name": "gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI4698DAOZ_seqspec.yaml.gz",
1987            "upload_status": "validated"
1988        }
1989    ],
1990    "input_for": [
1991        "/analysis-sets/IGVFDS8088PKAX/"
1992    ],
1993    "lab": {
1994        "@id": "/labs/jason-buenrostro/",
1995        "title": "Jason Buenrostro, Broad"
1996    },
1997    "multiome_size": 2,
1998    "onlist_files": [
1999        "/tabular-files/IGVFFI1312HTQX/",
2000        "/tabular-files/IGVFFI0400MBIM/"
2001    ],
2002    "onlist_method": "product",
2003    "preferred_assay_title": "SHARE-seq",
2004    "protocols": [
2005        "https://www.protocols.io/view/share-seq-protocol-v2-2-di3y4gpw"
2006    ],
2007    "related_multiome_datasets": [
2008        {
2009            "@id": "/measurement-sets/IGVFDS9080FVAM/",
2010            "accession": "IGVFDS9080FVAM",
2011            "status": "released"
2012        }
2013    ],
2014    "release_timestamp": "2025-04-10T21:01:56.343258+00:00",
2015    "samples": [
2016        {
2017            "@id": "/in-vitro-systems/IGVFSM6804CCZD/",
2018            "@type": [
2019                "InVitroSystem",
2020                "Biosample",
2021                "Sample",
2022                "Item"
2023            ],
2024            "accession": "IGVFSM6804CCZD",
2025            "aliases": [
2026                "buenrostro-bernstein:BioSam 4879_SS-PKR 180"
2027            ],
2028            "cellular_sub_pool": "SS-PKR 180",
2029            "classifications": [
2030                "pooled cell specimen",
2031                "differentiated cell specimen"
2032            ],
2033            "institutional_certificates": [
2034                {
2035                    "@id": "/institutional-certificates/26d0a66b-5c86-4326-b305-806fb13d2ae5/",
2036                    "certificate_identifier": "IP113-01",
2037                    "controlled_access": true,
2038                    "data_use_limitation": "GRU",
2039                    "status": "released"
2040                },
2041                {
2042                    "@id": "/institutional-certificates/31aa03ce-8ec8-409b-8a6c-c115297c10f4/",
2043                    "certificate_identifier": "IP113-02",
2044                    "controlled_access": true,
2045                    "data_use_limitation": "GRU",
2046                    "status": "released"
2047                },
2048                {
2049                    "@id": "/institutional-certificates/07b1e07f-a66a-4bd5-9c1a-a8632e734789/",
2050                    "certificate_identifier": "IP113-03",
2051                    "controlled_access": true,
2052                    "data_use_limitation": "GRU",
2053                    "status": "released"
2054                },
2055                {
2056                    "@id": "/institutional-certificates/3c3d7aa1-227e-43c8-8c68-2d3ad8e280b9/",
2057                    "certificate_identifier": "IP113-04",
2058                    "controlled_access": true,
2059                    "data_use_limitation": "GRU",
2060                    "status": "released"
2061                },
2062                {
2063                    "@id": "/institutional-certificates/dff99f30-9e29-4410-bdb4-eed4b70432cf/",
2064                    "certificate_identifier": "IP113-05",
2065                    "controlled_access": true,
2066                    "data_use_limitation": "GRU",
2067                    "status": "released"
2068                },
2069                {
2070                    "@id": "/institutional-certificates/10318039-d9e6-4dd0-8d92-4c551493b9fe/",
2071                    "certificate_identifier": "IP113-06",
2072                    "controlled_access": true,
2073                    "data_use_limitation": "GRU",
2074                    "status": "released"
2075                },
2076                {
2077                    "@id": "/institutional-certificates/32e245d0-ae4b-4334-b826-ed5bf00f111f/",
2078                    "certificate_identifier": "IP113-07",
2079                    "controlled_access": true,
2080                    "data_use_limitation": "GRU",
2081                    "status": "released"
2082                },
2083                {
2084                    "@id": "/institutional-certificates/35c8ed2e-cf1b-4cdd-a6ee-e766e7c3d954/",
2085                    "certificate_identifier": "IP113-08",
2086                    "controlled_access": true,
2087                    "data_use_limitation": "GRU",
2088                    "status": "released"
2089                },
2090                {
2091                    "@id": "/institutional-certificates/70134af2-c4fd-43b4-96a6-9133a119a715/",
2092                    "certificate_identifier": "IP113-09",
2093                    "controlled_access": true,
2094                    "data_use_limitation": "GRU",
2095                    "status": "released"
2096                },
2097                {
2098                    "@id": "/institutional-certificates/8a10acc0-7e24-4912-8833-10141ccf9b5f/",
2099                    "certificate_identifier": "IP113-10",
2100                    "controlled_access": true,
2101                    "data_use_limitation": "GRU",
2102                    "status": "released"
2103                },
2104                {
2105                    "@id": "/institutional-certificates/21c46421-0482-4d0d-ad82-99387fc6add6/",
2106                    "certificate_identifier": "IP113-11",
2107                    "controlled_access": true,
2108                    "data_use_limitation": "GRU",
2109                    "status": "released"
2110                },
2111                {
2112                    "@id": "/institutional-certificates/74917306-afc2-447b-88b2-a97e3e758518/",
2113                    "certificate_identifier": "IP113-15",
2114                    "controlled_access": true,
2115                    "data_use_limitation": "GRU",
2116                    "status": "released"
2117                },
2118                {
2119                    "@id": "/institutional-certificates/b117b3dd-25d9-4262-a262-630852050446/",
2120                    "certificate_identifier": "IP113-12",
2121                    "controlled_access": true,
2122                    "data_use_limitation": "GRU",
2123                    "status": "released"
2124                },
2125                {
2126                    "@id": "/institutional-certificates/ae438897-696e-4b7a-98a2-e72438a76b31/",
2127                    "certificate_identifier": "IP113-13",
2128                    "controlled_access": true,
2129                    "data_use_limitation": "GRU",
2130                    "status": "released"
2131                },
2132                {
2133                    "@id": "/institutional-certificates/4542d787-ea26-4176-b01c-5c45ca11b802/",
2134                    "certificate_identifier": "IP113-14",
2135                    "controlled_access": true,
2136                    "data_use_limitation": "GRU",
2137                    "status": "released"
2138                },
2139                {
2140                    "@id": "/institutional-certificates/fc5dc734-179b-45b8-bb32-e4f57a6bf59c/",
2141                    "certificate_identifier": "IP113-16",
2142                    "controlled_access": true,
2143                    "data_use_limitation": "GRU",
2144                    "status": "released"
2145                },
2146                {
2147                    "@id": "/institutional-certificates/ebddd6b0-c53f-4e05-a451-b5167df7cebd/",
2148                    "certificate_identifier": "IP113-18",
2149                    "controlled_access": true,
2150                    "data_use_limitation": "GRU",
2151                    "status": "released"
2152                },
2153                {
2154                    "@id": "/institutional-certificates/cf9e5e74-e4e6-40d4-bf04-c86fafe9d17e/",
2155                    "certificate_identifier": "IP113-17",
2156                    "controlled_access": true,
2157                    "data_use_limitation": "GRU",
2158                    "status": "released"
2159                },
2160                {
2161                    "@id": "/institutional-certificates/109b8309-9842-4caa-80f7-9f3d1be0c8c1/",
2162                    "certificate_identifier": "IP113-19",
2163                    "controlled_access": true,
2164                    "data_use_limitation": "GRU",
2165                    "status": "released"
2166                },
2167                {
2168                    "@id": "/institutional-certificates/d1431ff4-0095-49ba-a179-5fe34043afeb/",
2169                    "certificate_identifier": "IP113-20",
2170                    "controlled_access": true,
2171                    "data_use_limitation": "GRU",
2172                    "status": "released"
2173                }
2174            ],
2175            "sample_terms": [
2176                {
2177                    "@id": "/sample-terms/EFO_0004905/",
2178                    "@type": [
2179                        "SampleTerm",
2180                        "OntologyTerm",
2181                        "Item"
2182                    ],
2183                    "status": "released",
2184                    "summary": "induced pluripotent stem cell",
2185                    "term_name": "induced pluripotent stem cell"
2186                }
2187            ],
2188            "status": "released",
2189            "summary": "Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 180)",
2190            "targeted_sample_term": {
2191                "@id": "/sample-terms/CL_0011020/",
2192                "status": "released",
2193                "term_name": "neural progenitor cell"
2194            },
2195            "taxa": "Homo sapiens"
2196        }
2197    ],
2198    "schema_version": "26",
2199    "status": "released",
2200    "submitted_by": {
2201        "@id": "/users/c0838247-5022-46cf-a8fa-426e73bf4c94/",
2202        "title": "Siddarth Wekhande"
2203    },
2204    "submitted_files_timestamp": "2024-08-20T15:20:52.740153+00:00",
2205    "summary": "single-cell ATAC-seq (SHARE-seq)",
2206    "uuid": "bc4df98d-9949-4b98-8214-eb85e3a46148"
2207}