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IGVFDS2800PFJK

released
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 1), male, Homo sapiens (49 years)
Protocols
Aliases
bradley-bernstein:scRNA Lib 4
buenrostro-bernstein:scRNA Lib 4

Sequencing Results (Illumina)

16 items
fastq
reads
R1
2340
410 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1574
473 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2340
992 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2532
966 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2244
993 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2532
398 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1382
482 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1478
1.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1478
488 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1574
1.3 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 1), male, Homo sapiens (49 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1511
  • buenrostro-bernstein:Donor 1511
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 4
  • buenrostro-bernstein:scATAC Lib 4
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad