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IGVFDS2636NOED

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (29 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 41
buenrostro-bernstein:scATAC Lib 41

Sequencing Results (Illumina)

16 items
fastq
reads
R1
1551
4.0 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2509
286 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1743
7.8 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2509
502 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2317
506 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2605
284 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1455
8.3 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2413
287 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2605
501 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1551
7.8 KB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (29 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1510
  • buenrostro-bernstein:Donor 1510
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 41
  • buenrostro-bernstein:scRNA Lib 41
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad