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IGVFDS2610IANK

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File Set Type
experimental data
Summary
scRNA-seq
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • multiplexed sample: Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 2 days; Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 6 days; ... and 2 more samples
Protocols
Aliases
harinder-singh:Bcells_don1_scRNAseq_measurement
Attribution
Harinder Singh, University of Pittsburgh

Sequencing Results (Illumina)

8 items
Read Names
fastq
reads
R1
1
Read 1
1
15 GB
Harinder Singh, University of Pittsburgh
validated
fastq
reads
I2
1
2
3.6 GB
Harinder Singh, University of Pittsburgh
validated
fastq
reads
I2
1
1
3.6 GB
Harinder Singh, University of Pittsburgh
validated
fastq
reads
I1
1
1
3.1 GB
Harinder Singh, University of Pittsburgh
validated
fastq
reads
R2
1
Read 2
2
35 GB
Harinder Singh, University of Pittsburgh
validated
fastq
reads
R1
1
Read 1
2
15 GB
Harinder Singh, University of Pittsburgh
validated
fastq
reads
I1
1
2
3.1 GB
Harinder Singh, University of Pittsburgh
validated
fastq
reads
R2
1
Read 2
1
35 GB
Harinder Singh, University of Pittsburgh
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Associated Construct Library Sets
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 2 days; Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 6 days; ... and 2 more samples

Donors

1 item
Accession
Aliases
Sex
Taxa
  • harinder-singh:donor_1
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
scRNA-seq: filtered feature barcode matrix
  • harinder-singh:Bcells_don1_scRNAseq_measurement_analysis_set
Harinder Singh, University of Pittsburgh

Auxiliary Datasets

1 item
Accession
Type
Summary
Files
Aliases
Lab
AuxiliarySet
cell hashing barcode sequencing for scRNA-seq
  • harinder-singh:multiplexed_scRNAseq_don1_r1_HTO
Harinder Singh, University of Pittsburgh