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IGVFDS2476NYCP

released
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 4), male, Homo sapiens (29 years)
Protocols
Aliases
bradley-bernstein:scRNA Lib 21
buenrostro-bernstein:scRNA Lib 21

Sequencing Results (Illumina)

16 items
fastq
reads
R1
1704
985 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2470
371 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1416
967 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1608
954 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1512
990 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2278
372 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1704
2.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1512
2.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2278
823 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2374
826 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 4), male, Homo sapiens (29 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1509
  • buenrostro-bernstein:Donor 1509
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 21
  • buenrostro-bernstein:scATAC Lib 21
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad