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IGVFDS2282GLQQ

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 173)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 404
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

33 items
Read Names
fastq
reads
R2
4095
Read 2
22523KLT3
575 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8636
Read 2
22LMVNLT4
621 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8540
Read 2
22LMVNLT4
610 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8444
Read 1
22LMVNLT4
658 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8828
Barcode index
22LMVNLT4
367 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9020
Barcode index
22LMVNLT4
361 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8732
Read 1
22LMVNLT4
633 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8924
Read 2
22LMVNLT4
577 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4059
Read 1
22523KLT3
1.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8636
Read 1
22LMVNLT4
637 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 173)

Donors

89 items
Aliases
  • buenrostro-bernstein:Donor 1719
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1735
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1681
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1665
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1663
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1661
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1675
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1694
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1668
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 359
Jason Buenrostro, Broad