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IGVFDS2248KOLH

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 2), male, Homo sapiens (49 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 10
buenrostro-bernstein:scATAC Lib 10

Sequencing Results (Illumina)

16 items
fastq
reads
R2
1489
7.6 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1393
8.7 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1681
8.6 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1393
5.1 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1585
4.2 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2447
400 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2255
399 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2543
397 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2255
692 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2351
402 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 2), male, Homo sapiens (49 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1511
  • buenrostro-bernstein:Donor 1511
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 10
  • buenrostro-bernstein:scRNA Lib 10
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad