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IGVFDS1387CFOT

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 8), male, Homo sapiens (37 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 48
buenrostro-bernstein:scATAC Lib 48

Sequencing Results (Illumina)

16 items
fastq
reads
R2
2427
942 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1661
4.2 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1565
3.8 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2619
542 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1757
4.2 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2331
939 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2523
937 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2523
547 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1469
8.4 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1469
4.5 KB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 8), male, Homo sapiens (37 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1507
  • buenrostro-bernstein:Donor 1507
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 48
  • buenrostro-bernstein:scRNA Lib 48
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad