{
"@context": "/terms/",
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"MeasurementSet",
"FileSet",
"Item"
],
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"aliases": [
"bradley-bernstein:scATAC Lib 48",
"buenrostro-bernstein:scATAC Lib 48"
],
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"status": "released",
"term_name": "single-cell ATAC-seq"
},
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{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS1387CFOT](/measurement-sets/IGVFDS1387CFOT/) has sequence file(s): [IGVFFI0838NTXX](/sequence-files/IGVFFI0838NTXX/), [IGVFFI1118BWAW](/sequence-files/IGVFFI1118BWAW/), [IGVFFI8285YAUC](/sequence-files/IGVFFI8285YAUC/), [IGVFFI7821FYWA](/sequence-files/IGVFFI7821FYWA/), [IGVFFI3375GSJH](/sequence-files/IGVFFI3375GSJH/), [IGVFFI0775YJON](/sequence-files/IGVFFI0775YJON/), [IGVFFI8321REQQ](/sequence-files/IGVFFI8321REQQ/), [IGVFFI3989XRJF](/sequence-files/IGVFFI3989XRJF/), [IGVFFI1045DJZR](/sequence-files/IGVFFI1045DJZR/), [IGVFFI2963PZZG](/sequence-files/IGVFFI2963PZZG/), [IGVFFI0529UDRT](/sequence-files/IGVFFI0529UDRT/), [IGVFFI9455TKBY](/sequence-files/IGVFFI9455TKBY/), [IGVFFI4065HEKE](/sequence-files/IGVFFI4065HEKE/), [IGVFFI1508GUYJ](/sequence-files/IGVFFI1508GUYJ/), [IGVFFI2353MUPB](/sequence-files/IGVFFI2353MUPB/), [IGVFFI0293RVPO](/sequence-files/IGVFFI0293RVPO/) which do not have any `seqspecs`. Sequence files in a file set are expected to link to a sequence specification file.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS1387CFOT/"
},
{
"category": "mismatched status",
"detail": "Released primary cell [IGVFSM4912FPBQ](/primary-cells/IGVFSM4912FPBQ/) has in progress subobject source [jason-buenrostro](/sources/jason-buenrostro/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/primary-cells/IGVFSM4912FPBQ/"
}
],
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{
"category": "missing barcode onlist",
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}
]
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"aliases": [
"bradley-bernstein:BioSam 4568_SS-PKR 8",
"buenrostro-bernstein:BioSam 4568_SS-PKR 8"
],
"classifications": [
"primary cell"
],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0002371/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "bone marrow",
"term_name": "bone marrow"
}
],
"status": "released",
"summary": "bone marrow cell (cellular sub pool: SS-PKR 8), male, Homo sapiens (37 years)",
"taxa": "Homo sapiens"
}
],
"schema_version": "23",
"status": "released",
"submitted_by": {
"@id": "/users/c0838247-5022-46cf-a8fa-426e73bf4c94/",
"title": "Siddarth Wekhande"
},
"submitted_files_timestamp": "2024-02-12T21:47:33.033181+00:00",
"summary": "single-cell ATAC-seq (SHARE-seq)",
"uuid": "2de9d7f6-4ccc-4496-b842-b664a312f37a"
}