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IGVFDS1199VPTM

released
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (26 years)
Protocols
Aliases
bradley-bernstein:scRNA Lib 37
buenrostro-bernstein:scRNA Lib 37

Sequencing Results (Illumina)

16 items
fastq
reads
R1
2310
434 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1448
585 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2598
425 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1448
1.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1640
581 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1736
1.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1640
1.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1736
595 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2502
929 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1544
1.4 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (26 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1506
  • buenrostro-bernstein:Donor 1506
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 37
  • buenrostro-bernstein:scATAC Lib 37
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad