{
"@context": "/terms/",
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"MeasurementSet",
"FileSet",
"Item"
],
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"aliases": [
"bradley-bernstein:scRNA Lib 37",
"buenrostro-bernstein:scRNA Lib 37"
],
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"status": "released",
"term_name": "single-cell RNA sequencing assay"
},
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"INTERNAL_ACTION": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS1199VPTM](/measurement-sets/IGVFDS1199VPTM/) has sequence file(s): [IGVFFI3717GKLS](/sequence-files/IGVFFI3717GKLS/), [IGVFFI0883WSZA](/sequence-files/IGVFFI0883WSZA/), [IGVFFI7985GNWA](/sequence-files/IGVFFI7985GNWA/), [IGVFFI9439LCVR](/sequence-files/IGVFFI9439LCVR/), [IGVFFI6896BOAF](/sequence-files/IGVFFI6896BOAF/), [IGVFFI9018RJZH](/sequence-files/IGVFFI9018RJZH/), [IGVFFI1225RMWD](/sequence-files/IGVFFI1225RMWD/), [IGVFFI7595XBYH](/sequence-files/IGVFFI7595XBYH/), [IGVFFI6178BMHW](/sequence-files/IGVFFI6178BMHW/), [IGVFFI6297PYDI](/sequence-files/IGVFFI6297PYDI/), [IGVFFI6490TQKH](/sequence-files/IGVFFI6490TQKH/), [IGVFFI6265WAJL](/sequence-files/IGVFFI6265WAJL/), [IGVFFI8748DJIA](/sequence-files/IGVFFI8748DJIA/), [IGVFFI0218MZCJ](/sequence-files/IGVFFI0218MZCJ/), [IGVFFI8274QOSG](/sequence-files/IGVFFI8274QOSG/), [IGVFFI9977LSRT](/sequence-files/IGVFFI9977LSRT/) which do not have any `seqspecs`. Sequence files in a file set are expected to link to a sequence specification file.",
"level": 30,
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"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS1199VPTM/"
},
{
"category": "mismatched status",
"detail": "Released primary cell [IGVFSM1533LKGV](/primary-cells/IGVFSM1533LKGV/) has in progress subobject source [jason-buenrostro](/sources/jason-buenrostro/).",
"level": 30,
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"name": "audit_item_status",
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}
],
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{
"category": "missing barcode onlist",
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}
]
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"sample_terms": [
{
"@id": "/sample-terms/UBERON_0002371/",
"@type": [
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"OntologyTerm",
"Item"
],
"status": "released",
"summary": "bone marrow",
"term_name": "bone marrow"
}
],
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"summary": "bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (26 years)",
"taxa": "Homo sapiens"
}
],
"schema_version": "23",
"status": "released",
"submitted_by": {
"@id": "/users/c0838247-5022-46cf-a8fa-426e73bf4c94/",
"title": "Siddarth Wekhande"
},
"submitted_files_timestamp": "2024-02-12T21:23:47.946008+00:00",
"summary": "single-cell RNA sequencing assay (SHARE-seq)",
"uuid": "809a8bab-9f81-4214-82f2-be448d05ef3f"
}