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IGVFDS1138LJOC

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 1), male, Homo sapiens (49 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 4
buenrostro-bernstein:scATAC Lib 4

Sequencing Results (Illumina)

16 items
fastq
reads
R2
2531
2.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2435
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1573
141 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1669
107 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1477
54 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2243
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1669
50 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2339
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1477
118 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1573
64 KB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 1), male, Homo sapiens (49 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1511
  • buenrostro-bernstein:Donor 1511
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 4
  • buenrostro-bernstein:scRNA Lib 4
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad