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IGVFDS0826VLKA

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 206)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 591
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

33 items
Read Names
fastq
reads
R1
4082
Read 1
22523KLT3
1.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8701
Barcode index
22LMVNLT4
420 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4046
Read 1
22523KLT3
1.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8605
Read 2
22LMVNLT4
687 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4082
Read 2
22523KLT3
593 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8509
Read 2
22LMVNLT4
717 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8893
Read 1
22LMVNLT4
722 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8797
Read 1
22LMVNLT4
711 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8701
Read 2
22LMVNLT4
698 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4010
Barcode index
22523KLT3
513 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 206)

Donors

99 items
Aliases
  • buenrostro-bernstein:Donor 1943
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1909
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1937
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1907
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1963
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1952
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1946
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1982
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1975
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 382
Jason Buenrostro, Broad