IGVFDS0826VLKA

1{
2    "@context": "/terms/",
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6        "FileSet",
7        "Item"
8    ],
9    "accession": "IGVFDS0826VLKA",
10    "aliases": [
11        "buenrostro-bernstein:scATAC Lib 591"
12    ],
13    "assay_term": {
14        "@id": "/assay-terms/OBI_0002764/",
15        "assay_slims": [
16            "chromatin accessibility"
17        ],
18        "status": "released",
19        "term_name": "single-cell ATAC-seq"
20    },
21    "audit": {
22        "INTERNAL_ACTION": [
23            {
24                "category": "missing publication",
25                "detail": "Measurement set [IGVFDS0826VLKA](/measurement-sets/IGVFDS0826VLKA/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
26                "level": 30,
27                "level_name": "INTERNAL_ACTION",
28                "name": "audit_file_set_missing_publication",
29                "path": "/measurement-sets/IGVFDS0826VLKA/"
30            },
31            {
32                "category": "mismatched status",
33                "detail": "Released measurement set [IGVFDS0826VLKA](/measurement-sets/IGVFDS0826VLKA/) has in progress subobject tabular file [IGVFFI0400MBIM](/tabular-files/IGVFFI0400MBIM/).",
34                "level": 30,
35                "level_name": "INTERNAL_ACTION",
36                "name": "audit_item_status",
37                "path": "/measurement-sets/IGVFDS0826VLKA/"
38            },
39            {
40                "category": "mismatched status",
41                "detail": "Released measurement set [IGVFDS0826VLKA](/measurement-sets/IGVFDS0826VLKA/) has in progress subobject tabular file [IGVFFI1312HTQX](/tabular-files/IGVFFI1312HTQX/).",
42                "level": 30,
43                "level_name": "INTERNAL_ACTION",
44                "name": "audit_item_status",
45                "path": "/measurement-sets/IGVFDS0826VLKA/"
46            },
47            {
48                "category": "missing publication",
49                "detail": "In vitro system [IGVFSM7848MXIA](/in-vitro-systems/IGVFSM7848MXIA/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
50                "level": 30,
51                "level_name": "INTERNAL_ACTION",
52                "name": "audit_sample_missing_publication",
53                "path": "/in-vitro-systems/IGVFSM7848MXIA/"
54            }
55        ],
56        "NOT_COMPLIANT": [
57            {
58                "category": "missing strand specificity",
59                "detail": "Measurement set [IGVFDS0826VLKA](/measurement-sets/IGVFDS0826VLKA/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
60                "level": 50,
61                "level_name": "NOT_COMPLIANT",
62                "name": "audit_missing_strand_specificity",
63                "path": "/measurement-sets/IGVFDS0826VLKA/"
64            }
65        ]
66    },
67    "award": {
68        "@id": "/awards/HG011986/",
69        "component": "mapping",
70        "contact_pi": {
71            "@id": "/users/33c6eb70-e143-4f77-9661-4b3905737daa/",
72            "title": "Jason Buenrostro"
73        },
74        "title": "A foundational resource of functional elements, TF footprints and gene regulatory interactions"
75    },
76    "control_for": [],
77    "controlled_access": true,
78    "creation_timestamp": "2024-08-20T15:00:34.986783+00:00",
79    "data_use_limitation_summaries": [
80        "GRU"
81    ],
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85            "accession": "IGVFDO3652LJLN",
86            "aliases": [
87                "buenrostro-bernstein:Donor 1932"
88            ],
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91            "taxa": "Homo sapiens"
92        },
93        {
94            "@id": "/human-donors/IGVFDO1512EGWF/",
95            "accession": "IGVFDO1512EGWF",
96            "aliases": [
97                "buenrostro-bernstein:Donor 1981"
98            ],
99            "sex": "unspecified",
100            "status": "released",
101            "taxa": "Homo sapiens"
102        },
103        {
104            "@id": "/human-donors/IGVFDO5920NCRK/",
105            "accession": "IGVFDO5920NCRK",
106            "aliases": [
107                "buenrostro-bernstein:Donor 1973"
108            ],
109            "sex": "unspecified",
110            "status": "released",
111            "taxa": "Homo sapiens"
112        },
113        {
114            "@id": "/human-donors/IGVFDO6704QEET/",
115            "accession": "IGVFDO6704QEET",
116            "aliases": [
117                "buenrostro-bernstein:Donor 1917"
118            ],
119            "sex": "unspecified",
120            "status": "released",
121            "taxa": "Homo sapiens"
122        },
123        {
124            "@id": "/human-donors/IGVFDO8886WODZ/",
125            "accession": "IGVFDO8886WODZ",
126            "aliases": [
127                "buenrostro-bernstein:Donor 1922"
128            ],
129            "sex": "unspecified",
130            "status": "released",
131            "taxa": "Homo sapiens"
132        },
133        {
134            "@id": "/human-donors/IGVFDO9063CMXP/",
135            "accession": "IGVFDO9063CMXP",
136            "aliases": [
137                "buenrostro-bernstein:Donor 1979"
138            ],
139            "sex": "unspecified",
140            "status": "released",
141            "taxa": "Homo sapiens"
142        },
143        {
144            "@id": "/human-donors/IGVFDO3154SUBV/",
145            "accession": "IGVFDO3154SUBV",
146            "aliases": [
147                "buenrostro-bernstein:Donor 1746"
148            ],
149            "sex": "unspecified",
150            "status": "released",
151            "taxa": "Homo sapiens"
152        },
153        {
154            "@id": "/human-donors/IGVFDO1064GZAS/",
155            "accession": "IGVFDO1064GZAS",
156            "aliases": [
157                "buenrostro-bernstein:Donor 1982"
158            ],
159            "sex": "unspecified",
160            "status": "released",
161            "taxa": "Homo sapiens"
162        },
163        {
164            "@id": "/human-donors/IGVFDO2811ZFFP/",
165            "accession": "IGVFDO2811ZFFP",
166            "aliases": [
167                "buenrostro-bernstein:Donor 1913"
168            ],
169            "sex": "unspecified",
170            "status": "released",
171            "taxa": "Homo sapiens"
172        },
173        {
174            "@id": "/human-donors/IGVFDO2605TXDO/",
175            "accession": "IGVFDO2605TXDO",
176            "aliases": [
177                "buenrostro-bernstein:Donor 1787"
178            ],
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180            "status": "released",
181            "taxa": "Homo sapiens"
182        },
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187                "buenrostro-bernstein:Donor 1954"
188            ],
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191            "taxa": "Homo sapiens"
192        },
193        {
194            "@id": "/human-donors/IGVFDO9907ZZVD/",
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197                "buenrostro-bernstein:Donor 1902"
198            ],
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200            "status": "released",
201            "taxa": "Homo sapiens"
202        },
203        {
204            "@id": "/human-donors/IGVFDO8124AYVF/",
205            "accession": "IGVFDO8124AYVF",
206            "aliases": [
207                "buenrostro-bernstein:Donor 1740"
208            ],
209            "sex": "unspecified",
210            "status": "released",
211            "taxa": "Homo sapiens"
212        },
213        {
214            "@id": "/human-donors/IGVFDO3633ISAY/",
215            "accession": "IGVFDO3633ISAY",
216            "aliases": [
217                "buenrostro-bernstein:Donor 1915"
218            ],
219            "sex": "unspecified",
220            "status": "released",
221            "taxa": "Homo sapiens"
222        },
223        {
224            "@id": "/human-donors/IGVFDO2540COFN/",
225            "accession": "IGVFDO2540COFN",
226            "aliases": [
227                "buenrostro-bernstein:Donor 1912"
228            ],
229            "sex": "unspecified",
230            "status": "released",
231            "taxa": "Homo sapiens"
232        },
233        {
234            "@id": "/human-donors/IGVFDO1467HGMO/",
235            "accession": "IGVFDO1467HGMO",
236            "aliases": [
237                "buenrostro-bernstein:Donor 1969"
238            ],
239            "sex": "unspecified",
240            "status": "released",
241            "taxa": "Homo sapiens"
242        },
243        {
244            "@id": "/human-donors/IGVFDO5934RGQS/",
245            "accession": "IGVFDO5934RGQS",
246            "aliases": [
247                "buenrostro-bernstein:Donor 1956"
248            ],
249            "sex": "unspecified",
250            "status": "released",
251            "taxa": "Homo sapiens"
252        },
253        {
254            "@id": "/human-donors/IGVFDO7506JTFC/",
255            "accession": "IGVFDO7506JTFC",
256            "aliases": [
257                "buenrostro-bernstein:Donor 1931"
258            ],
259            "sex": "unspecified",
260            "status": "released",
261            "taxa": "Homo sapiens"
262        },
263        {
264            "@id": "/human-donors/IGVFDO1363RREJ/",
265            "accession": "IGVFDO1363RREJ",
266            "aliases": [
267                "buenrostro-bernstein:Donor 1939"
268            ],
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270            "status": "released",
271            "taxa": "Homo sapiens"
272        },
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274            "@id": "/human-donors/IGVFDO8271RBMD/",
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276            "aliases": [
277                "buenrostro-bernstein:Donor 1936"
278            ],
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280            "status": "released",
281            "taxa": "Homo sapiens"
282        },
283        {
284            "@id": "/human-donors/IGVFDO9835EEAJ/",
285            "accession": "IGVFDO9835EEAJ",
286            "aliases": [
287                "buenrostro-bernstein:Donor 1951"
288            ],
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290            "status": "released",
291            "taxa": "Homo sapiens"
292        },
293        {
294            "@id": "/human-donors/IGVFDO8195QBTP/",
295            "accession": "IGVFDO8195QBTP",
296            "aliases": [
297                "buenrostro-bernstein:Donor 1958"
298            ],
299            "sex": "unspecified",
300            "status": "released",
301            "taxa": "Homo sapiens"
302        },
303        {
304            "@id": "/human-donors/IGVFDO4923LWHA/",
305            "accession": "IGVFDO4923LWHA",
306            "aliases": [
307                "buenrostro-bernstein:Donor 1957"
308            ],
309            "sex": "unspecified",
310            "status": "released",
311            "taxa": "Homo sapiens"
312        },
313        {
314            "@id": "/human-donors/IGVFDO8663MIYC/",
315            "accession": "IGVFDO8663MIYC",
316            "aliases": [
317                "buenrostro-bernstein:Donor 1925"
318            ],
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320            "status": "released",
321            "taxa": "Homo sapiens"
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324            "@id": "/human-donors/IGVFDO3701XUXY/",
325            "accession": "IGVFDO3701XUXY",
326            "aliases": [
327                "buenrostro-bernstein:Donor 1959"
328            ],
329            "sex": "unspecified",
330            "status": "released",
331            "taxa": "Homo sapiens"
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333        {
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335            "accession": "IGVFDO3881ZKMA",
336            "aliases": [
337                "buenrostro-bernstein:Donor 1984"
338            ],
339            "sex": "unspecified",
340            "status": "released",
341            "taxa": "Homo sapiens"
342        },
343        {
344            "@id": "/human-donors/IGVFDO6296JPHU/",
345            "accession": "IGVFDO6296JPHU",
346            "aliases": [
347                "buenrostro-bernstein:Donor 1918"
348            ],
349            "sex": "unspecified",
350            "status": "released",
351            "taxa": "Homo sapiens"
352        },
353        {
354            "@id": "/human-donors/IGVFDO4983SZXB/",
355            "accession": "IGVFDO4983SZXB",
356            "aliases": [
357                "buenrostro-bernstein:Donor 1988"
358            ],
359            "sex": "unspecified",
360            "status": "released",
361            "taxa": "Homo sapiens"
362        },
363        {
364            "@id": "/human-donors/IGVFDO0980QZSD/",
365            "accession": "IGVFDO0980QZSD",
366            "aliases": [
367                "buenrostro-bernstein:Donor 1946"
368            ],
369            "sex": "unspecified",
370            "status": "released",
371            "taxa": "Homo sapiens"
372        },
373        {
374            "@id": "/human-donors/IGVFDO6064BKKJ/",
375            "accession": "IGVFDO6064BKKJ",
376            "aliases": [
377                "buenrostro-bernstein:Donor 1980"
378            ],
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380            "status": "released",
381            "taxa": "Homo sapiens"
382        },
383        {
384            "@id": "/human-donors/IGVFDO8459PAOB/",
385            "accession": "IGVFDO8459PAOB",
386            "aliases": [
387                "buenrostro-bernstein:Donor 1953"
388            ],
389            "sex": "unspecified",
390            "status": "released",
391            "taxa": "Homo sapiens"
392        },
393        {
394            "@id": "/human-donors/IGVFDO2476MGFK/",
395            "accession": "IGVFDO2476MGFK",
396            "aliases": [
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399            "sex": "unspecified",
400            "status": "released",
401            "taxa": "Homo sapiens"
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403        {
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405            "accession": "IGVFDO5473XXFQ",
406            "aliases": [
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408            ],
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411            "taxa": "Homo sapiens"
412        },
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415            "accession": "IGVFDO2893BVNI",
416            "aliases": [
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418            ],
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420            "status": "released",
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422        },
423        {
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425            "accession": "IGVFDO9815AMKV",
426            "aliases": [
427                "buenrostro-bernstein:Donor 1926"
428            ],
429            "sex": "unspecified",
430            "status": "released",
431            "taxa": "Homo sapiens"
432        },
433        {
434            "@id": "/human-donors/IGVFDO2583SIHN/",
435            "accession": "IGVFDO2583SIHN",
436            "aliases": [
437                "buenrostro-bernstein:Donor 1938"
438            ],
439            "sex": "unspecified",
440            "status": "released",
441            "taxa": "Homo sapiens"
442        },
443        {
444            "@id": "/human-donors/IGVFDO2217VSIY/",
445            "accession": "IGVFDO2217VSIY",
446            "aliases": [
447                "buenrostro-bernstein:Donor 1955"
448            ],
449            "sex": "unspecified",
450            "status": "released",
451            "taxa": "Homo sapiens"
452        },
453        {
454            "@id": "/human-donors/IGVFDO1255IJEH/",
455            "accession": "IGVFDO1255IJEH",
456            "aliases": [
457                "buenrostro-bernstein:Donor 1975"
458            ],
459            "sex": "unspecified",
460            "status": "released",
461            "taxa": "Homo sapiens"
462        },
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466            "aliases": [
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471            "taxa": "Homo sapiens"
472        },
473        {
474            "@id": "/human-donors/IGVFDO3469EFJR/",
475            "accession": "IGVFDO3469EFJR",
476            "aliases": [
477                "buenrostro-bernstein:Donor 1741"
478            ],
479            "sex": "unspecified",
480            "status": "released",
481            "taxa": "Homo sapiens"
482        },
483        {
484            "@id": "/human-donors/IGVFDO9561MSAD/",
485            "accession": "IGVFDO9561MSAD",
486            "aliases": [
487                "buenrostro-bernstein:Donor 1976"
488            ],
489            "sex": "unspecified",
490            "status": "released",
491            "taxa": "Homo sapiens"
492        },
493        {
494            "@id": "/human-donors/IGVFDO6331OQFD/",
495            "accession": "IGVFDO6331OQFD",
496            "aliases": [
497                "buenrostro-bernstein:Donor 1920"
498            ],
499            "sex": "unspecified",
500            "status": "released",
501            "taxa": "Homo sapiens"
502        },
503        {
504            "@id": "/human-donors/IGVFDO8042WODZ/",
505            "accession": "IGVFDO8042WODZ",
506            "aliases": [
507                "buenrostro-bernstein:Donor 1944"
508            ],
509            "sex": "unspecified",
510            "status": "released",
511            "taxa": "Homo sapiens"
512        },
513        {
514            "@id": "/human-donors/IGVFDO2166LUJJ/",
515            "accession": "IGVFDO2166LUJJ",
516            "aliases": [
517                "buenrostro-bernstein:Donor 1934"
518            ],
519            "sex": "unspecified",
520            "status": "released",
521            "taxa": "Homo sapiens"
522        },
523        {
524            "@id": "/human-donors/IGVFDO5885PQJM/",
525            "accession": "IGVFDO5885PQJM",
526            "aliases": [
527                "buenrostro-bernstein:Donor 1658"
528            ],
529            "sex": "unspecified",
530            "status": "released",
531            "taxa": "Homo sapiens"
532        },
533        {
534            "@id": "/human-donors/IGVFDO6156FWSA/",
535            "accession": "IGVFDO6156FWSA",
536            "aliases": [
537                "buenrostro-bernstein:Donor 1790"
538            ],
539            "sex": "unspecified",
540            "status": "released",
541            "taxa": "Homo sapiens"
542        },
543        {
544            "@id": "/human-donors/IGVFDO4449DKJZ/",
545            "accession": "IGVFDO4449DKJZ",
546            "aliases": [
547                "buenrostro-bernstein:Donor 1919"
548            ],
549            "sex": "unspecified",
550            "status": "released",
551            "taxa": "Homo sapiens"
552        },
553        {
554            "@id": "/human-donors/IGVFDO3385RWXZ/",
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556            "aliases": [
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559            "sex": "unspecified",
560            "status": "released",
561            "taxa": "Homo sapiens"
562        },
563        {
564            "@id": "/human-donors/IGVFDO0123YZDN/",
565            "accession": "IGVFDO0123YZDN",
566            "aliases": [
567                "buenrostro-bernstein:Donor 1943"
568            ],
569            "sex": "unspecified",
570            "status": "released",
571            "taxa": "Homo sapiens"
572        },
573        {
574            "@id": "/human-donors/IGVFDO5869XCBR/",
575            "accession": "IGVFDO5869XCBR",
576            "aliases": [
577                "buenrostro-bernstein:Donor 1945"
578            ],
579            "sex": "unspecified",
580            "status": "released",
581            "taxa": "Homo sapiens"
582        },
583        {
584            "@id": "/human-donors/IGVFDO8979DYIF/",
585            "accession": "IGVFDO8979DYIF",
586            "aliases": [
587                "buenrostro-bernstein:Donor 1743"
588            ],
589            "sex": "unspecified",
590            "status": "released",
591            "taxa": "Homo sapiens"
592        },
593        {
594            "@id": "/human-donors/IGVFDO2318JQUM/",
595            "accession": "IGVFDO2318JQUM",
596            "aliases": [
597                "buenrostro-bernstein:Donor 1791"
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600            "status": "released",
601            "taxa": "Homo sapiens"
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603        {
604            "@id": "/human-donors/IGVFDO3010FULG/",
605            "accession": "IGVFDO3010FULG",
606            "aliases": [
607                "buenrostro-bernstein:Donor 1929"
608            ],
609            "sex": "unspecified",
610            "status": "released",
611            "taxa": "Homo sapiens"
612        },
613        {
614            "@id": "/human-donors/IGVFDO4283QEWA/",
615            "accession": "IGVFDO4283QEWA",
616            "aliases": [
617                "buenrostro-bernstein:Donor 1974"
618            ],
619            "sex": "unspecified",
620            "status": "released",
621            "taxa": "Homo sapiens"
622        },
623        {
624            "@id": "/human-donors/IGVFDO0417TJMX/",
625            "accession": "IGVFDO0417TJMX",
626            "aliases": [
627                "buenrostro-bernstein:Donor 1907"
628            ],
629            "sex": "unspecified",
630            "status": "released",
631            "taxa": "Homo sapiens"
632        },
633        {
634            "@id": "/human-donors/IGVFDO2588YUMG/",
635            "accession": "IGVFDO2588YUMG",
636            "aliases": [
637                "buenrostro-bernstein:Donor 1905"
638            ],
639            "sex": "unspecified",
640            "status": "released",
641            "taxa": "Homo sapiens"
642        },
643        {
644            "@id": "/human-donors/IGVFDO3006ZNMC/",
645            "accession": "IGVFDO3006ZNMC",
646            "aliases": [
647                "buenrostro-bernstein:Donor 1928"
648            ],
649            "sex": "unspecified",
650            "status": "released",
651            "taxa": "Homo sapiens"
652        },
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1895            "status": "released",
1896            "submitted_file_name": "gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI4820TPLV_seqspec.yaml.gz",
1897            "upload_status": "validated"
1898        },
1899        {
1900            "@id": "/configuration-files/IGVFFI8629MNRM/",
1901            "accession": "IGVFFI8629MNRM",
1902            "aliases": [
1903                "buenrostro-bernstein:SS-LS_8989_seqspec"
1904            ],
1905            "content_type": "seqspec",
1906            "creation_timestamp": "2025-03-28T19:41:26.804075+00:00",
1907            "file_format": "yaml",
1908            "file_size": 1328,
1909            "href": "/configuration-files/IGVFFI8629MNRM/@@download/IGVFFI8629MNRM.yaml.gz",
1910            "s3_uri": "s3://igvf-files/2025/03/28/0a4d5b05-1513-41c3-9902-8f9d05ad4d1e/IGVFFI8629MNRM.yaml.gz",
1911            "status": "released",
1912            "submitted_file_name": "gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI2054TFRV_seqspec.yaml.gz",
1913            "upload_status": "validated"
1914        },
1915        {
1916            "@id": "/configuration-files/IGVFFI4199ONVE/",
1917            "accession": "IGVFFI4199ONVE",
1918            "aliases": [
1919                "buenrostro-bernstein:SS-LS_8797_seqspec"
1920            ],
1921            "content_type": "seqspec",
1922            "creation_timestamp": "2025-03-28T19:01:40.935880+00:00",
1923            "file_format": "yaml",
1924            "file_size": 1330,
1925            "href": "/configuration-files/IGVFFI4199ONVE/@@download/IGVFFI4199ONVE.yaml.gz",
1926            "s3_uri": "s3://igvf-files/2025/03/28/92b73077-206e-45ca-8402-d3c4d82a51e1/IGVFFI4199ONVE.yaml.gz",
1927            "status": "released",
1928            "submitted_file_name": "gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI1137QDCQ_seqspec.yaml.gz",
1929            "upload_status": "validated"
1930        },
1931        {
1932            "@id": "/configuration-files/IGVFFI4521MBOE/",
1933            "accession": "IGVFFI4521MBOE",
1934            "aliases": [
1935                "buenrostro-bernstein:SS-LS_8893_seqspec"
1936            ],
1937            "content_type": "seqspec",
1938            "creation_timestamp": "2025-03-28T19:26:37.486277+00:00",
1939            "file_format": "yaml",
1940            "file_size": 1332,
1941            "href": "/configuration-files/IGVFFI4521MBOE/@@download/IGVFFI4521MBOE.yaml.gz",
1942            "s3_uri": "s3://igvf-files/2025/03/28/dae75223-f88b-4d93-bf28-2a51233ff68c/IGVFFI4521MBOE.yaml.gz",
1943            "status": "released",
1944            "submitted_file_name": "gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI1131BMHX_seqspec.yaml.gz",
1945            "upload_status": "validated"
1946        },
1947        {
1948            "@id": "/configuration-files/IGVFFI8078ZUXP/",
1949            "accession": "IGVFFI8078ZUXP",
1950            "aliases": [
1951                "buenrostro-bernstein:SS-LS_9085_seqspec"
1952            ],
1953            "content_type": "seqspec",
1954            "creation_timestamp": "2025-03-28T19:58:40.258113+00:00",
1955            "file_format": "yaml",
1956            "file_size": 1332,
1957            "href": "/configuration-files/IGVFFI8078ZUXP/@@download/IGVFFI8078ZUXP.yaml.gz",
1958            "s3_uri": "s3://igvf-files/2025/03/28/a50ceebb-ed2a-4c1f-b672-74af5128a82c/IGVFFI8078ZUXP.yaml.gz",
1959            "status": "released",
1960            "submitted_file_name": "gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI1881DUOU_seqspec.yaml.gz",
1961            "upload_status": "validated"
1962        },
1963        {
1964            "@id": "/configuration-files/IGVFFI2377KJXY/",
1965            "accession": "IGVFFI2377KJXY",
1966            "aliases": [
1967                "buenrostro-bernstein:SS-LS_9181_seqspec"
1968            ],
1969            "content_type": "seqspec",
1970            "creation_timestamp": "2025-03-28T20:15:35.491743+00:00",
1971            "file_format": "yaml",
1972            "file_size": 1328,
1973            "href": "/configuration-files/IGVFFI2377KJXY/@@download/IGVFFI2377KJXY.yaml.gz",
1974            "s3_uri": "s3://igvf-files/2025/03/28/37846f7f-2cb8-46a2-90e7-46a3feddffe6/IGVFFI2377KJXY.yaml.gz",
1975            "status": "released",
1976            "submitted_file_name": "gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI6490ABOV_seqspec.yaml.gz",
1977            "upload_status": "validated"
1978        }
1979    ],
1980    "input_for": [
1981        "/analysis-sets/IGVFDS4654GWHA/"
1982    ],
1983    "lab": {
1984        "@id": "/labs/jason-buenrostro/",
1985        "title": "Jason Buenrostro, Broad"
1986    },
1987    "multiome_size": 2,
1988    "onlist_files": [
1989        "/tabular-files/IGVFFI1312HTQX/",
1990        "/tabular-files/IGVFFI0400MBIM/"
1991    ],
1992    "onlist_method": "product",
1993    "preferred_assay_title": "SHARE-seq",
1994    "protocols": [
1995        "https://www.protocols.io/view/share-seq-protocol-v2-2-di3y4gpw"
1996    ],
1997    "related_multiome_datasets": [
1998        {
1999            "@id": "/measurement-sets/IGVFDS9493HAGQ/",
2000            "accession": "IGVFDS9493HAGQ",
2001            "status": "released"
2002        }
2003    ],
2004    "release_timestamp": "2025-04-10T20:57:08.378791+00:00",
2005    "samples": [
2006        {
2007            "@id": "/in-vitro-systems/IGVFSM7848MXIA/",
2008            "@type": [
2009                "InVitroSystem",
2010                "Biosample",
2011                "Sample",
2012                "Item"
2013            ],
2014            "accession": "IGVFSM7848MXIA",
2015            "aliases": [
2016                "buenrostro-bernstein:BioSam 4881_SS-PKR 206"
2017            ],
2018            "cellular_sub_pool": "SS-PKR 206",
2019            "classifications": [
2020                "pooled cell specimen",
2021                "differentiated cell specimen"
2022            ],
2023            "institutional_certificates": [
2024                {
2025                    "@id": "/institutional-certificates/26d0a66b-5c86-4326-b305-806fb13d2ae5/",
2026                    "certificate_identifier": "IP113-01",
2027                    "controlled_access": true,
2028                    "data_use_limitation": "GRU",
2029                    "status": "released"
2030                },
2031                {
2032                    "@id": "/institutional-certificates/31aa03ce-8ec8-409b-8a6c-c115297c10f4/",
2033                    "certificate_identifier": "IP113-02",
2034                    "controlled_access": true,
2035                    "data_use_limitation": "GRU",
2036                    "status": "released"
2037                },
2038                {
2039                    "@id": "/institutional-certificates/07b1e07f-a66a-4bd5-9c1a-a8632e734789/",
2040                    "certificate_identifier": "IP113-03",
2041                    "controlled_access": true,
2042                    "data_use_limitation": "GRU",
2043                    "status": "released"
2044                },
2045                {
2046                    "@id": "/institutional-certificates/3c3d7aa1-227e-43c8-8c68-2d3ad8e280b9/",
2047                    "certificate_identifier": "IP113-04",
2048                    "controlled_access": true,
2049                    "data_use_limitation": "GRU",
2050                    "status": "released"
2051                },
2052                {
2053                    "@id": "/institutional-certificates/dff99f30-9e29-4410-bdb4-eed4b70432cf/",
2054                    "certificate_identifier": "IP113-05",
2055                    "controlled_access": true,
2056                    "data_use_limitation": "GRU",
2057                    "status": "released"
2058                },
2059                {
2060                    "@id": "/institutional-certificates/10318039-d9e6-4dd0-8d92-4c551493b9fe/",
2061                    "certificate_identifier": "IP113-06",
2062                    "controlled_access": true,
2063                    "data_use_limitation": "GRU",
2064                    "status": "released"
2065                },
2066                {
2067                    "@id": "/institutional-certificates/32e245d0-ae4b-4334-b826-ed5bf00f111f/",
2068                    "certificate_identifier": "IP113-07",
2069                    "controlled_access": true,
2070                    "data_use_limitation": "GRU",
2071                    "status": "released"
2072                },
2073                {
2074                    "@id": "/institutional-certificates/35c8ed2e-cf1b-4cdd-a6ee-e766e7c3d954/",
2075                    "certificate_identifier": "IP113-08",
2076                    "controlled_access": true,
2077                    "data_use_limitation": "GRU",
2078                    "status": "released"
2079                },
2080                {
2081                    "@id": "/institutional-certificates/70134af2-c4fd-43b4-96a6-9133a119a715/",
2082                    "certificate_identifier": "IP113-09",
2083                    "controlled_access": true,
2084                    "data_use_limitation": "GRU",
2085                    "status": "released"
2086                },
2087                {
2088                    "@id": "/institutional-certificates/8a10acc0-7e24-4912-8833-10141ccf9b5f/",
2089                    "certificate_identifier": "IP113-10",
2090                    "controlled_access": true,
2091                    "data_use_limitation": "GRU",
2092                    "status": "released"
2093                },
2094                {
2095                    "@id": "/institutional-certificates/21c46421-0482-4d0d-ad82-99387fc6add6/",
2096                    "certificate_identifier": "IP113-11",
2097                    "controlled_access": true,
2098                    "data_use_limitation": "GRU",
2099                    "status": "released"
2100                },
2101                {
2102                    "@id": "/institutional-certificates/74917306-afc2-447b-88b2-a97e3e758518/",
2103                    "certificate_identifier": "IP113-15",
2104                    "controlled_access": true,
2105                    "data_use_limitation": "GRU",
2106                    "status": "released"
2107                },
2108                {
2109                    "@id": "/institutional-certificates/b117b3dd-25d9-4262-a262-630852050446/",
2110                    "certificate_identifier": "IP113-12",
2111                    "controlled_access": true,
2112                    "data_use_limitation": "GRU",
2113                    "status": "released"
2114                },
2115                {
2116                    "@id": "/institutional-certificates/ae438897-696e-4b7a-98a2-e72438a76b31/",
2117                    "certificate_identifier": "IP113-13",
2118                    "controlled_access": true,
2119                    "data_use_limitation": "GRU",
2120                    "status": "released"
2121                },
2122                {
2123                    "@id": "/institutional-certificates/4542d787-ea26-4176-b01c-5c45ca11b802/",
2124                    "certificate_identifier": "IP113-14",
2125                    "controlled_access": true,
2126                    "data_use_limitation": "GRU",
2127                    "status": "released"
2128                },
2129                {
2130                    "@id": "/institutional-certificates/fc5dc734-179b-45b8-bb32-e4f57a6bf59c/",
2131                    "certificate_identifier": "IP113-16",
2132                    "controlled_access": true,
2133                    "data_use_limitation": "GRU",
2134                    "status": "released"
2135                },
2136                {
2137                    "@id": "/institutional-certificates/ebddd6b0-c53f-4e05-a451-b5167df7cebd/",
2138                    "certificate_identifier": "IP113-18",
2139                    "controlled_access": true,
2140                    "data_use_limitation": "GRU",
2141                    "status": "released"
2142                },
2143                {
2144                    "@id": "/institutional-certificates/cf9e5e74-e4e6-40d4-bf04-c86fafe9d17e/",
2145                    "certificate_identifier": "IP113-17",
2146                    "controlled_access": true,
2147                    "data_use_limitation": "GRU",
2148                    "status": "released"
2149                },
2150                {
2151                    "@id": "/institutional-certificates/109b8309-9842-4caa-80f7-9f3d1be0c8c1/",
2152                    "certificate_identifier": "IP113-19",
2153                    "controlled_access": true,
2154                    "data_use_limitation": "GRU",
2155                    "status": "released"
2156                },
2157                {
2158                    "@id": "/institutional-certificates/d1431ff4-0095-49ba-a179-5fe34043afeb/",
2159                    "certificate_identifier": "IP113-20",
2160                    "controlled_access": true,
2161                    "data_use_limitation": "GRU",
2162                    "status": "released"
2163                }
2164            ],
2165            "sample_terms": [
2166                {
2167                    "@id": "/sample-terms/EFO_0004905/",
2168                    "@type": [
2169                        "SampleTerm",
2170                        "OntologyTerm",
2171                        "Item"
2172                    ],
2173                    "status": "released",
2174                    "summary": "induced pluripotent stem cell",
2175                    "term_name": "induced pluripotent stem cell"
2176                }
2177            ],
2178            "status": "released",
2179            "summary": "Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 206)",
2180            "targeted_sample_term": {
2181                "@id": "/sample-terms/CL_0011020/",
2182                "status": "released",
2183                "term_name": "neural progenitor cell"
2184            },
2185            "taxa": "Homo sapiens"
2186        }
2187    ],
2188    "schema_version": "26",
2189    "status": "released",
2190    "submitted_by": {
2191        "@id": "/users/c0838247-5022-46cf-a8fa-426e73bf4c94/",
2192        "title": "Siddarth Wekhande"
2193    },
2194    "submitted_files_timestamp": "2024-08-20T15:21:15.292184+00:00",
2195    "summary": "single-cell ATAC-seq (SHARE-seq)",
2196    "uuid": "ebe3092e-ecae-4dbe-af33-b1f94b4a566a"
2197}