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IGVFDS0001EZIS

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 6), male, Homo sapiens (37 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 36
buenrostro-bernstein:scATAC Lib 36

Sequencing Results (Illumina)

16 items
fastq
reads
R1
2499
493 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1637
126 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2307
492 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2499
845 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1637
59 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1541
65 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1541
141 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1733
63 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2403
852 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2595
843 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 6), male, Homo sapiens (37 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1507
  • buenrostro-bernstein:Donor 1507
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 36
  • buenrostro-bernstein:scRNA Lib 36
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad