Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
MatrixFile
/
IGVFFI6356ADHE
IGVFFI6356ADHE
released
validated
Json view
File Set
IGVFDS2413FYLA
(intermediate analysis of Parse SPLiT-seq data)
Analysis Step Version
/analysis-step-versions/7575fac5-2297-495f-ad92-000d9acf05f6/
File Format
tar
Content Type
sparse gene count matrix
Content Summary
cell by gene sparse gene count matrix
Aliases
ali-mortazavi:IGVF_B01_Subpool_4_total+core
md5sum
b3c9b9b42857033f2355a373f5ef54fa
Content MD5sum
b3187b44752106a009ff25a5a0af63dd
File Size
414 MB
Submitted File Name
IGVF_B01_Subpool_4_total+core.tar.gz
Summary
cell by gene sparse gene count matrix
Matrix Details
First Dimension
cell
Second Dimension
gene
Reference Files
2 items
Accession
File Format
Content Type
Lab
File Size
Upload Status
IGVFFI9282QLXO
fasta
genome reference
External Lab, Community
871 MB
validated
IGVFFI9744VSJF
gtf
transcriptome reference
External Lab, Community
29 MB
validated
Files IGVFFI6356ADHE Derives From
4 items
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
IGVFFI2185ZXQY
IGVFDS6946BUZB
fastq
reads
Ali Mortazavi, UCI
6.7 GB
validated
IGVFFI4299WSBH
IGVFDS6946BUZB
fastq
reads
Ali Mortazavi, UCI
13 GB
validated
IGVFFI4373RWTV
IGVFDS6946BUZB
fastq
reads
Ali Mortazavi, UCI
12 GB
validated
IGVFFI5598BXFK
IGVFDS6946BUZB
fastq
reads
Ali Mortazavi, UCI
7.1 GB
validated
Files Derived From This File
1 item
Accession
File Format
Content Type
Lab
File Size
Upload Status
IGVFFI7274KDWO
h5ad
sparse gene count matrix
Ali Mortazavi, UCI
1.1 GB
validated
Attribution
Award
HG012077
Principal Investigator(s)
Lior Pachter
,
Kim Green
,
Grant MacGregor
,
Ali Mortazavi
,
Barbara Wold
Contact P.I.
Ali Mortazavi
Lab
Ali Mortazavi, UCI